RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 PSMA3P25788 255 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 GDF1P27539 372 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 ATP6V1E1P36543 226 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 OR3A1P47881 315 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 CAPZA1P52907 286 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 UCNP55089 124 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 RPP38P78345 283 aaKnown RBP1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 NFE2L1Q14494 772 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 UGCGQ16739 394 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 GSG1Q2KHT4 349 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 ISXQ2M1V0 245 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 MPP7Q5T2T1 576 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 FAM46CQ5VWP2 391 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 TXNRD3NBQ6F5E7 133 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 GET4Q7L5D6 327 aaPredicted RBP1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 OTOAQ7RTW8 1153 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 PIWIL3Q7Z3Z3 882 aaKnown RBP1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 ADCK2Q7Z695 626 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 GLRX5Q86SX6 157 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 ZSCAN30Q86W11 494 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 UNC45BQ8IWX7 931 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 SLC22A18ASQ8N1D0 253 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 CARNMT1Q8N4J0 409 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 ARL10Q8N8L6 244 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 SPC24Q8NBT2 197 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 OCC1Q8TAD7 63 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 MR1Q95460 341 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 ZBED6CLQ96FA7 236 aaPredicted RBP1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 MAPKAP1Q9BPZ7 522 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 CCM2Q9BSQ5 444 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 IKZF5Q9H5V7 419 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 AMBNQ9NP70 447 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 RAB9BQ9NP90 201 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 CHCHD3Q9NX63 227 aaKnown RBP1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 RUVBL2Q9Y230 463 aaKnown RBP1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 HBS1LQ9Y450 684 aaKnown RBP1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 MEGF6O75095 1541 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 A0A087WV48 116 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 A0A0B4J203 849 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 A4D1N5 150 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 HTR3EA5X5Y0 456 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 OR5H15A6NDH6 313 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 ANXA2P2A6NMY6 339 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 RSPH10B2B2RC85 870 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 MCF2LO15068 1137 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 FMO6PO60774 539 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 FHP07954 510 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 RSPH10BP0C881 870 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 YWHAHQ04917 246 aaPredicted RBP1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 ZNF273Q14593 569 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 TYSND1Q2T9J0 566 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 NHSL2Q5HYW2 709 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 LRRC73Q5JTD7 316 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 C6orf136Q5SQH8 315 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 WDR25Q64LD2 544 aaPredicted RBP1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 IYDQ6PHW0 289 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 FAM43BQ6ZT52 329 aaPredicted RBP1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 MSANTD1Q6ZTZ1 278 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 NLRP14Q86W24 1093 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 CROCCP3Q8IVE0 287 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 SIX6OS1Q8N1H7 587 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 GPR137CQ8N3F9 429 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 C10orf53Q8N6V4 93 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 BEST4Q8NFU0 473 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 SNX21Q969T3 373 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 ERO1AQ96HE7 468 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 CDHR1Q96JP9 859 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 AK8Q96MA6 479 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 INTS14Q96SY0 518 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 FUT8Q9BYC5 575 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 NACAP1Q9BZK3 213 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 MMADHCQ9H3L0 296 aaPredicted RBP1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 CWC25Q9NXE8 425 aaPredicted RBP1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 TMEM9Q9P0T7 183 aa1.86□□□□□ -2.11
GTF3C3-209ENST00000466862 DDX39AO00148 427 aaKnown RBP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 PPIP5K2O43314 1243 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 SCO2O43819 266 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 ZNF861PO60384 105 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 SIX3O95343 332 aaPredicted RBP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 MOCS2O96007 188 aaPredicted RBP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 IGKV3-11P04433 115 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 PDGFRAP16234 1089 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 STMN1P16949 149 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 CASTP20810 708 aaKnown RBP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 PSMB4P28070 264 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 TIA1P31483 386 aaKnown RBP eCLIP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 TCF7P36402 384 aaPredicted RBP1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 SLC1A3P43003 542 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 BRCC3P46736 316 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 PAX2Q02962 417 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 AP1B1Q10567 949 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 LCP2Q13094 533 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 MORF4L2Q15014 288 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 ABRAXAS2Q15018 415 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 KIAA0040Q15053 153 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 MEP1BQ16820 701 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 SMU1Q2TAY7 513 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 LIPJQ5W064 366 aa1.85□□□□□ -2.11
GTF3C3-209ENST00000466862 ZNF776Q68DI1 518 aaPredicted RBP1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms