RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 WLSQ5T9L3 541 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 ZNF321PQ8N8H1 164 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 SREK1Q8WXA9 508 aaKnown RBP18.29■□□□□ 0.52
VARS-221ENST00000463184 NINJ1Q92982 152 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 KCNC2Q96PR1 638 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 FOXC2Q99958 501 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 TMUB1Q9BVT8 246 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 DERL2Q9GZP9 239 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 ANKZF1Q9H8Y5 726 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 SMYD2Q9NRG4 433 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 WWOXQ9NZC7 414 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 COPS7AQ9UBW8 275 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 Q9UFV3 132 aa18.29■□□□□ 0.52
VARS-221ENST00000463184 ATP6AP2A0A1C7CYW4 349 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 FAM159BA6NKW6 160 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 TAPBPO15533 448 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 HCN1O60741 890 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 ZNF354AO60765 605 aaPredicted RBP18.28■□□□□ 0.52
VARS-221ENST00000463184 DIAPH2O60879 1101 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 LDB3O75112 727 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 ATP6AP2O75787 350 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 NADKO95544 446 aaPredicted RBP18.28■□□□□ 0.52
VARS-221ENST00000463184 PHBP35232 272 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 DNASE1L1P49184 302 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 FOLH1Q04609 750 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 LAPTM5Q13571 262 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 PIGGQ5H8A4 983 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 FBF1Q8TES7 1133 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.28■□□□□ 0.52
VARS-221ENST00000463184 NRGNQ92686 78 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 WDR34Q96EX3 536 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 F2RL3Q96RI0 385 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 TMEM79Q9BSE2 394 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 TBCDQ9BTW9 1192 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 EFCAB11Q9BUY7 163 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 CXXC4Q9H2H0 198 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 CDC42EP4Q9H3Q1 356 aaKnown RBP18.28■□□□□ 0.52
VARS-221ENST00000463184 RHOJQ9H4E5 214 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 DNAJB12Q9NXW2 375 aaKnown RBP18.28■□□□□ 0.52
VARS-221ENST00000463184 TUBA8Q9NY65 449 aaPredicted RBP18.28■□□□□ 0.52
VARS-221ENST00000463184 L3MBTL1Q9Y468 752 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 ATG4BQ9Y4P1 393 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 SPACA6W5XKT8 324 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 EML6Q6ZMW3 1958 aa18.28■□□□□ 0.52
VARS-221ENST00000463184 PRAMEF4O60810 478 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 STK16O75716 305 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 C1QAP02745 245 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 CELA3AP09093 270 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 CCL3P10147 92 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 GABRA1P14867 456 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 ADH7P40394 386 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 PEX19P40855 299 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 SLC12A2P55011 1212 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 DLX5P56178 289 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 TBL3Q12788 808 aaKnown RBP18.27■□□□□ 0.52
VARS-221ENST00000463184 DOC2AQ14183 400 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 HIST2H2ACQ16777 129 aaPredicted RBP18.27■□□□□ 0.52
VARS-221ENST00000463184 PAGE2BQ5JRK9 111 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 C1orf185Q5T7R7 199 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 PRAMEF9Q5VWM5 478 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 SLC22A10Q63ZE4 541 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 HIST2H2AA3Q6FI13 130 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 SULT1C3Q6IMI6 304 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 ADNP2Q6IQ32 1131 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 ARSKQ6UWY0 536 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 LIX1LQ8IVB5 337 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 CHDHQ8NE62 594 aaPredicted RBP18.27■□□□□ 0.52
VARS-221ENST00000463184 NUBPLQ8TB37 319 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 ZNF721Q8TF20 911 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 POM121Q96HA1 1249 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 MAPKAP1Q9BPZ7 522 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 EXO5Q9H790 373 aa18.27■□□□□ 0.52
VARS-221ENST00000463184 TRGV5A0A0B4J1U4 118 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 CXorf49A8MYA2 514 aaPredicted RBP18.26■□□□□ 0.51
VARS-221ENST00000463184 CTAG2O75638 210 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 ETHE1O95571 254 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 COX7A2P14406 83 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 ATP5A1P25705 553 aaKnown RBP18.26■□□□□ 0.51
VARS-221ENST00000463184 POU4F1Q01851 419 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 NAB1Q13506 487 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 PDK4Q16654 411 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 KBTBD12Q3ZCT8 623 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 RIPPLY2Q5TAB7 128 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 ZNF793Q6ZN11 406 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 UBE3DQ7Z6J8 389 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 GPSM1Q86YR5 675 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 ACOT4Q8N9L9 421 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 SNX31Q8N9S9 440 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 ANKRD9Q96BM1 317 aaPredicted RBP18.26■□□□□ 0.51
VARS-221ENST00000463184 CPNE1Q99829 537 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 MCMBPQ9BTE3 642 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 FUT8Q9BYC5 575 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 SEMA4BQ9NPR2 832 aaPredicted RBP18.26■□□□□ 0.51
VARS-221ENST00000463184 ALKBH4Q9NXW9 302 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 TXNDC16Q9P2K2 825 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 B4GALT7Q9UBV7 327 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 PCDHGB3Q9Y5G1 929 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.26■□□□□ 0.51
VARS-221ENST00000463184 ITPR3Q14573 2671 aa18.26■□□□□ 0.51
VARS-221ENST00000463184 WISP3O95389 354 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms