RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 MAGED4Q96JG8 741 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 GPR137Q96N19 417 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 NEDD4LQ96PU5 975 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 TESK2Q96S53 571 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 PCDHB18PQ96TA0 734 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 TUBA1CQ9BQE3 449 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 NUSAP1Q9BXS6 441 aaKnown RBP2.65□□□□□ -1.99
HPS3-203ENST00000460822 NMNAT2Q9BZQ4 307 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 CPVLQ9H3G5 476 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 MARCH7Q9H992 704 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 ZBTB20Q9HC78 741 aaPredicted RBP2.65□□□□□ -1.99
HPS3-203ENST00000460822 DDX28Q9NUL7 540 aaKnown RBP2.65□□□□□ -1.99
HPS3-203ENST00000460822 TBC1D13Q9NVG8 400 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 RAI14Q9P0K7 980 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 C19orf25Q9UFG5 118 aaPredicted RBP2.65□□□□□ -1.99
HPS3-203ENST00000460822 TEKT2Q9UIF3 430 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 NAALAD2Q9Y3Q0 740 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 ATG4BQ9Y4P1 393 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 CCDC141Q6ZP82 1450 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 ASXL1Q8IXJ9 1541 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 MADDQ8WXG6 1647 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 TRBV4-1A0A0J9YWV2 114 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 A0A0U1RQV5 110 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 A0A1B0GUL7 405 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 TMEM110-MUSTN1A8MSY1 372 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 A8MVM7 634 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 TULP2O00295 520 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 EPHB6O15197 1021 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 MAPK13O15264 365 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 NUDT21O43809 227 aaKnown RBP2.64□□□□□ -1.99
HPS3-203ENST00000460822 CSO75390 466 aaKnown RBP2.64□□□□□ -1.99
HPS3-203ENST00000460822 TOM1L1O75674 476 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 SYNGR4O95473 234 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 CALCAP01258 141 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 CLUP10909 449 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 CEACAM1P13688 526 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 DRD5P21918 477 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 CA6P23280 308 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 RIPK4P57078 832 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 MYL7Q01449 175 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 SP3Q02447 781 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 CCDC173Q0VFZ6 552 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 FUT7Q11130 342 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 SNX1Q13596 522 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 ITGA9Q13797 1035 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 RFTN1Q14699 578 aaPredicted RBP2.64□□□□□ -1.99
HPS3-203ENST00000460822 HEPACAMQ14CZ8 416 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 WDR43Q15061 677 aaKnown RBP eCLIP2.64□□□□□ -1.99
HPS3-203ENST00000460822 GPAT3Q53EU6 434 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 ARHGEF16Q5VV41 709 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 ZNF776Q68DI1 518 aaPredicted RBP2.64□□□□□ -1.99
HPS3-203ENST00000460822 FAM159AQ6UWV7 190 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 TMEM64Q6YI46 380 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 G2E3Q7L622 706 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 TRMT11Q7Z4G4 463 aaKnown RBP2.64□□□□□ -1.99
HPS3-203ENST00000460822 GRAMD2AQ8IUY3 354 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 ZDHHC21Q8IVQ6 265 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 SLC43A2Q8N370 569 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 LRRC17Q8N6Y2 441 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 STEAP2Q8NFT2 490 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 OR13C5Q8NGS8 318 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 OR13C2Q8NGS9 318 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 SLC35C1Q96A29 364 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 RAB39BQ96DA2 213 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 IL17FQ96PD4 163 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 GPA33Q99795 319 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 FICDQ9BVA6 458 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 FUNDC2Q9BWH2 189 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 THAP2Q9H0W7 228 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 PANK3Q9H999 370 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 PLEK2Q9NYT0 353 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 ATXN10Q9UBB4 475 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 CHRNA9Q9UGM1 479 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 ATP6V1HQ9UI12 483 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 MAN1B1Q9UKM7 699 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 MRPS7Q9Y2R9 242 aaKnown RBP2.64□□□□□ -1.99
HPS3-203ENST00000460822 LRP12Q9Y561 859 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 DDX49Q9Y6V7 483 aaKnown RBP2.64□□□□□ -1.99
HPS3-203ENST00000460822 NUP155O75694 1391 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 NUP160Q12769 1436 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 TROQ12816 1431 aaPredicted RBP2.64□□□□□ -1.99
HPS3-203ENST00000460822 C9orf84Q5VXU9 1444 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 SYNJ2O15056 1496 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 DISP1Q96F81 1524 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 ARHGEF5Q12774 1597 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 IQGAP3Q86VI3 1631 aa2.64□□□□□ -1.99
HPS3-203ENST00000460822 A0A1W2PS18 150 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 CTAGE15A4D2H0 777 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 SERINC4A6NH21 518 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 PRR23D1E9PI22 279 aaPredicted RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 XPO1O14980 1071 aaKnown RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 ABCC4O15439 1325 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 GLRA3O75311 464 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 CSDE1O75534 798 aaKnown RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 DFFBO76075 338 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 TSHBP01222 138 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 NGFRP08138 427 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 HMBSP08397 361 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 GSTA2P09210 222 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 IQCF3P0C7M6 154 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms