RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 PIK3CBP42338 1070 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 NEK2P51955 445 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 RNF4P78317 190 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 FOLH1Q04609 750 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 STX4Q12846 297 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 TRAF3Q13114 568 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 SLAMF1Q13291 335 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 CPSF6Q16630 551 aaKnown RBP eCLIP14□□□□□ -0.17
UBXN4-203ENST00000416538 AP5B1Q2VPB7 878 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 SP5Q6BEB4 398 aaPredicted RBP14□□□□□ -0.17
UBXN4-203ENST00000416538 BNC2Q6ZN30 1099 aaPredicted RBP14□□□□□ -0.17
UBXN4-203ENST00000416538 CCDC91Q7Z6B0 441 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 DOLPP1Q86YN1 238 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 C9orf40Q8IXQ3 194 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 ZCCHC7Q8N3Z6 543 aaKnown RBP14□□□□□ -0.17
UBXN4-203ENST00000416538 MARVELD2Q8N4S9 558 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 L3MBTL4Q8NA19 623 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 MORN4Q8NDC4 146 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 OR52N2Q8NGI0 321 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 UHMK1Q8TAS1 419 aaKnown RBP14□□□□□ -0.17
UBXN4-203ENST00000416538 AGAP11Q8TF27 550 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 DCAKDQ8WVC6 231 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 DAZLQ92904 295 aaKnown RBP14□□□□□ -0.17
UBXN4-203ENST00000416538 SCYL1Q96KG9 808 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 DMRTA2Q96SC8 542 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 FMO2Q99518 471 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 CCDC77Q9BR77 488 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 IPPKQ9H8X2 491 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 YARS2Q9Y2Z4 477 aaKnown RBP14□□□□□ -0.17
UBXN4-203ENST00000416538 C2orf72A6NCS6 295 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 A8MVJ9 347 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 TFECO14948 347 aaPredicted RBP13.99□□□□□ -0.17
UBXN4-203ENST00000416538 NADKO95544 446 aaPredicted RBP13.99□□□□□ -0.17
UBXN4-203ENST00000416538 CLPSP04118 112 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 ABOP16442 354 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 GCAP28676 217 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 PHBP35232 272 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 STT3AP46977 705 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 RAP1GDS1P52306 607 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 SERTAD2Q14140 314 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 RCN2Q14257 317 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 ZNF750Q32MQ0 723 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 LIPJQ5W064 366 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 ADGRD1Q6QNK2 874 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 LYPD8Q6UX82 237 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 IL20RBQ6UXL0 311 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 RPTNQ6XPR3 784 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 HSDL2Q6YN16 418 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 CHSY3Q70JA7 882 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 RPRMLQ8N4K4 120 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 POGLUT1Q8NBL1 392 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 ASB15Q8WXK1 588 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 ZNF592Q92610 1267 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 PPWD1Q96BP3 646 aaKnown RBP13.99□□□□□ -0.17
UBXN4-203ENST00000416538 RPF2Q9H7B2 306 aaKnown RBP13.99□□□□□ -0.17
UBXN4-203ENST00000416538 HPF1Q9NWY4 346 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 MTRF1LQ9UGC7 380 aaKnown RBP13.99□□□□□ -0.17
UBXN4-203ENST00000416538 PCTPQ9UKL6 214 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 ASB4Q9Y574 426 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 ANGPTL3Q9Y5C1 460 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 KLF2Q9Y5W3 355 aaPredicted RBP13.99□□□□□ -0.17
UBXN4-203ENST00000416538 LIPGQ9Y5X9 500 aa13.99□□□□□ -0.17
UBXN4-203ENST00000416538 A0A1B0GTH9 108 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 A0A1W2PR48 441 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 CCDC189A1A4V9 331 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 GLOD5A6NK44 160 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 TRIM49D1C9J1S8 452 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 HNRNPRO43390 633 aaKnown RBP13.98□□□□□ -0.17
UBXN4-203ENST00000416538 UGDHO60701 494 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 MLYCDO95822 493 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 AIFM1O95831 613 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 GBAP04062 536 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 TUBB4AP04350 444 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 INHBAP08476 426 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 RPS17P08708 135 aaKnown RBP13.98□□□□□ -0.17
UBXN4-203ENST00000416538 CCL3P10147 92 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 HTR1EP28566 365 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 ZNF630Q2M218 657 aaPredicted RBP13.98□□□□□ -0.17
UBXN4-203ENST00000416538 GPR180Q86V85 440 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 SLC34A3Q8N130 599 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 TMEM151AQ8N4L1 468 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 OR2M7Q8NG81 312 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 IFT81Q8WYA0 676 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 RGMAQ96B86 450 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 PHF21BQ96EK2 531 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 NOL11Q9H8H0 719 aaKnown RBP13.98□□□□□ -0.17
UBXN4-203ENST00000416538 TEX10Q9NXF1 929 aaPredicted RBP13.98□□□□□ -0.17
UBXN4-203ENST00000416538 ERVK-11Q9UQG0 969 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 PCDHGA11Q9Y5H2 935 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 MED12Q93074 2177 aa13.98□□□□□ -0.17
UBXN4-203ENST00000416538 PDZD2O15018 2839 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 POLQO75417 2590 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 CSMD2Q7Z408 3487 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 KIAA1549Q9HCM3 1950 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 SYNDIG1LA6NDD5 238 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 FAM166BA8MTA8 275 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 POC1B-GALNT4F8VUJ3 575 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 KLRC4-KLRK1H3BQV0 150 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 PPP6CO00743 305 aa13.97□□□□□ -0.17
UBXN4-203ENST00000416538 PROM1O43490 865 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms