RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 UTS2BQ765I0 119 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 HIST3H2AQ7L7L0 130 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 COMMD6Q7Z4G1 85 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 TRIM73Q86UV7 250 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 AGBL5Q8NDL9 886 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 ZNF248Q8NDW4 579 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 SLC37A2Q8TED4 501 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 DAZLQ92904 295 aaKnown RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 HIST1H2ACQ93077 130 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 RBM4BQ9BQ04 359 aaKnown RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 GORASP1Q9BQQ3 440 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 RBM4Q9BWF3 364 aaKnown RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 PACSIN3Q9UKS6 424 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 IGLV3-16A0A075B6K0 115 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 H0YIV9 168 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 GBAP04062 536 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 ITPKBP27987 946 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 PKLRP30613 574 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 STARP49675 285 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 XKP51811 444 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 ITGA1P56199 1179 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 RPS15P62841 145 aaKnown RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 TRA2BP62995 288 aaKnown RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 GPR18Q14330 331 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 TLDC1Q6P9B6 456 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 TP53I13Q8NBR0 393 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 GAB3Q8WWW8 586 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 CITED2Q99967 270 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 HHATLQ9HCP6 504 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 TAS2R9Q9NYW1 312 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 SERGEFQ9UGK8 458 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 MYO16Q9Y6X6 1858 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 ZNF860A6NHJ4 632 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 UGT2B11O75310 529 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 IFNW1P05000 195 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 EFNA1P20827 205 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 SOX6P35712 828 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 MASP1P48740 699 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 HTR6P50406 440 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 RGS8P57771 180 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 BNC1Q01954 994 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 ZP2Q05996 745 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 GRB7Q14451 532 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 NR1D2Q14995 579 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 FBXO42Q6P3S6 717 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 WASH2PQ6VEQ5 465 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 DTWD2Q8NBA8 298 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 DNAAF1Q8NEP3 725 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 SLC47A1Q96FL8 570 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 BHLHE41Q9C0J9 482 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 RPF2Q9H7B2 306 aaKnown RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 TPT1P8Q9HAU6 139 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 WASH6PQ9NQA3 447 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 TLCD2A6NGC4 264 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 FOXE1O00358 373 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 E2F3O00716 465 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 LYNP07948 512 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 TRIM23P36406 574 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 STARD6P59095 220 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 RHDQ02161 417 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 SERTAD2Q14140 314 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 ZNF630Q2M218 657 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 ARMCX4Q5H9R4 360 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 SPESP1Q6UW49 350 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 VRK3Q8IV63 474 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 ARL14Q8N4G2 192 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 L3MBTL4Q8NA19 623 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 SLC7A6OSQ96CW6 309 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 Q96MT0 163 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 CITED4Q96RK1 184 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 CDC6Q99741 560 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 TUBA8Q9NY65 449 aaPredicted RBP8.13□□□□□ -1.11
SYNE1-211ENST00000413186 ACTR3BQ9P1U1 418 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 ERVK-11Q9UQG0 969 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 HIF3AQ9Y2N7 669 aa8.13□□□□□ -1.11
SYNE1-211ENST00000413186 BRWD1Q9NSI6 2320 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 HYKKA2RU49 373 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 BLACEA4D250 179 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 CCDC182A6NF36 153 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 TRIM64A6NGJ6 449 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 TRIM64BA6NI03 449 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 LMO7DNF2Z398 122 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 AIPO00170 330 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 REM1O75628 298 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 UGT2B7P16662 529 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 ENGP17813 658 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 METAP1P53582 386 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 RPL19P84098 196 aaKnown RBP8.12□□□□□ -1.11
SYNE1-211ENST00000413186 DGCR6Q14129 220 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 PTGR1Q14914 329 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 TNFAIP8L2Q6P589 184 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-211ENST00000413186 OR8H2Q8N162 312 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 PHTF2Q8N3S3 785 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 IL22RA1Q8N6P7 574 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 ZNF527Q8NB42 609 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 PIK3C3Q8NEB9 887 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 OR8K5Q8NH50 307 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 RERGLQ9H628 205 aa8.12□□□□□ -1.11
SYNE1-211ENST00000413186 SMPD3Q9NY59 655 aaPredicted RBP8.12□□□□□ -1.11
SYNE1-211ENST00000413186 TBC1D29Q9UFV1 150 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms