RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.94□□□□□ -1.14
SNX13-201ENST00000409076 ELAC1Q9H777 363 aaKnown RBP7.94□□□□□ -1.14
SNX13-201ENST00000409076 MVB12BQ9H7P6 319 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 FZD3Q9NPG1 666 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 NECTIN3Q9NQS3 549 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 ZNF226Q9NYT6 803 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 TRIOO75962 3097 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 CHD7Q9P2D1 2997 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 A8MUA0 341 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 CDK1P06493 297 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 ADRA2AP08913 450 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 JUPP14923 745 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 ALAS2P22557 587 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 ACVR1BP36896 505 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 SPINT3P49223 89 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 STXBP1P61764 594 aaKnown RBP7.94□□□□□ -1.14
SNX13-201ENST00000409076 KCNJ10P78508 379 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 SP3Q02447 781 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 SPHARQ15513 63 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 PROX2Q3B8N5 592 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 TCEAL5Q5H9L2 206 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 ZNF730Q6ZMV8 503 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 GAREM2Q75VX8 874 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 SFTPA1Q8IWL2 248 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 GRPEL2Q8TAA5 225 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.94□□□□□ -1.141e-7■■■■■ 45.9
SNX13-201ENST00000409076 GCDHQ92947 438 aaPredicted RBP7.94□□□□□ -1.14
SNX13-201ENST00000409076 YIPF6Q96EC8 236 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 TRIM45Q9H8W5 580 aaPredicted RBP7.94□□□□□ -1.14
SNX13-201ENST00000409076 MKLN1Q9UL63 735 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 OR1A2Q9Y585 309 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 INSL5Q9Y5Q6 135 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 PEX16Q9Y5Y5 336 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 SIP14410 1827 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 ZNF701M0R085 212 aaPredicted RBP7.94□□□□□ -1.14
SNX13-201ENST00000409076 DVL2O14641 736 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 HPGDSO60760 199 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 ATG13O75143 517 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 POP7O75817 140 aaKnown RBP7.94□□□□□ -1.14
SNX13-201ENST00000409076 SEMA3DO95025 777 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 EOMESO95936 686 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 DRD5P21918 477 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 GGT2P36268 569 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 VIPR2P41587 438 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 SOX9P48436 509 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 CRISP1P54107 249 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 RPS25P62851 125 aaKnown RBP7.94□□□□□ -1.14
SNX13-201ENST00000409076 RPL6Q02878 288 aaKnown RBP7.94□□□□□ -1.14
SNX13-201ENST00000409076 RING1Q06587 406 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 ASTLQ6HA08 431 aaPredicted RBP7.94□□□□□ -1.14
SNX13-201ENST00000409076 TECPR1Q7Z6L1 1165 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 LACC1Q8IV20 430 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.94□□□□□ -1.14
SNX13-201ENST00000409076 DCAF4L2Q8NA75 395 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 OR10H4Q8NGA5 316 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 OR10G6Q8NH81 332 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 FAM46AQ96IP4 442 aaKnown RBP7.94□□□□□ -1.14
SNX13-201ENST00000409076 DOK1Q99704 481 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 SGIP1Q9BQI5 828 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 MMP27Q9H306 513 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 DNMT3BQ9UBC3 853 aaKnown RBP7.94□□□□□ -1.14
SNX13-201ENST00000409076 ZFR2Q9UPR6 939 aaKnown RBP7.94□□□□□ -1.14
SNX13-201ENST00000409076 CCL27Q9Y4X3 112 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 NEUROG3Q9Y4Z2 214 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 PLXNB2O15031 1838 aa7.94□□□□□ -1.14
SNX13-201ENST00000409076 LOC105369274A0A096LPK9 316 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 A0A1W2PQ72 361 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 ZSCAN5BA6NJL1 495 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 TRIM64CA6NLI5 447 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 C12orf71A8MTZ7 269 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 NOS1APO75052 506 aaPredicted RBP7.93□□□□□ -1.14
SNX13-201ENST00000409076 RPS3P23396 243 aaKnown RBP eCLIP7.93□□□□□ -1.14
SNX13-201ENST00000409076 NOS3P29474 1203 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 TIA1P31483 386 aaKnown RBP eCLIP7.93□□□□□ -1.14
SNX13-201ENST00000409076 TGFBR2P37173 567 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 NCBP2P52298 156 aaKnown RBP eCLIP7.93□□□□□ -1.14
SNX13-201ENST00000409076 GABARAPL2P60520 117 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 SELENOWP63302 87 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 GPR68Q15743 365 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 FLYWCH1Q4VC44 716 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 CCNJQ5T5M9 372 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 FAM27D1Q5T7N8 215 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 AGAP7PQ5VUJ5 663 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 ESPNLQ6ZVH7 1005 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 LAPTM4BQ86VI4 370 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 OR4N4Q8N0Y3 316 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 OR8H3Q8N146 312 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 ZNF433Q8N7K0 673 aaPredicted RBP7.93□□□□□ -1.14
SNX13-201ENST00000409076 AMER3Q8N944 861 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 ASCC1Q8N9N2 400 aaKnown RBP7.93□□□□□ -1.14
SNX13-201ENST00000409076 ZNF480Q8WV37 535 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 PLD4Q96BZ4 506 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 REPS1Q96D71 796 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 C11orf24Q96F05 449 aaPredicted RBP7.93□□□□□ -1.14
SNX13-201ENST00000409076 CCDC120Q96HB5 630 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 FERD3LQ96RJ6 166 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 SLC29A3Q9BZD2 475 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 TMED5Q9Y3A6 229 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 HCN4Q9Y3Q4 1203 aa7.93□□□□□ -1.14
SNX13-201ENST00000409076 A0A0B4J203 849 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms