RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 NPPBP16860 134 aa17.13■□□□□ 0.33
GNE-201ENST00000377902 ETV5P41161 510 aa17.13■□□□□ 0.33
GNE-201ENST00000377902 ETV1P50549 477 aa17.13■□□□□ 0.33
GNE-201ENST00000377902 DSTNP60981 165 aa17.13■□□□□ 0.33
GNE-201ENST00000377902 SCN1BQ07699 218 aa17.13■□□□□ 0.33
GNE-201ENST00000377902 GPAT3Q53EU6 434 aa17.13■□□□□ 0.33
GNE-201ENST00000377902 OR2G6Q5TZ20 316 aa17.13■□□□□ 0.33
GNE-201ENST00000377902 TCTN3Q6NUS6 607 aa17.13■□□□□ 0.33
GNE-201ENST00000377902 USP30Q70CQ3 517 aa17.13■□□□□ 0.33
GNE-201ENST00000377902 CADM2Q8N3J6 435 aa17.13■□□□□ 0.33
GNE-201ENST00000377902 CREB3L4Q8TEY5 395 aa17.13■□□□□ 0.33
GNE-201ENST00000377902 MVB12BQ9H7P6 319 aa17.13■□□□□ 0.33
GNE-201ENST00000377902 IL21Q9HBE4 155 aa17.13■□□□□ 0.33
GNE-201ENST00000377902 MALT1Q9UDY8 824 aa17.13■□□□□ 0.33
GNE-201ENST00000377902 PLA2G10O15496 165 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 ELAVL4P26378 380 aaKnown RBP17.12■□□□□ 0.33
GNE-201ENST00000377902 SDC2P34741 201 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 GPC1P35052 558 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 XKP51811 444 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 TLE2Q04725 743 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 FAM71E1Q6IPT2 247 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 APOBEC4Q8WW27 367 aaKnown RBP17.12■□□□□ 0.33
GNE-201ENST00000377902 SLC25A46Q96AG3 418 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 MND1Q9BWT6 205 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 RRAGCQ9HB90 399 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 TAAR2Q9P1P5 351 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 KCND3Q9UK17 655 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 BACE2Q9Y5Z0 518 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 CKAP5Q14008 2032 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 IFNA14P01570 189 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 CATP04040 527 aaKnown RBP17.12■□□□□ 0.33
GNE-201ENST00000377902 SELPP16109 830 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 MYL9P24844 172 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 TARDBPQ13148 414 aaKnown RBP eCLIP17.12■□□□□ 0.33
GNE-201ENST00000377902 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.12■□□□□ 0.33
GNE-201ENST00000377902 PYDC2Q56P42 97 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 ATAT1Q5SQI0 421 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 CASP12Q6UXS9 341 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 C11orf74Q86VG3 221 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 CRIPAKQ8N1N5 446 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 NELL2Q99435 816 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 TM9SF2Q99805 663 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 SLC22A4Q9H015 551 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 SLAMF7Q9NQ25 335 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 DMRT3Q9NQL9 472 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 SNX7Q9UNH6 387 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 GPSM3Q9Y4H4 160 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 KIAA1671Q9BY89 1806 aa17.12■□□□□ 0.33
GNE-201ENST00000377902 ANKDD1BA6NHY2 528 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 LATS1O95835 1130 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 ENDOUP21128 410 aaKnown RBP17.11■□□□□ 0.33
GNE-201ENST00000377902 GABRR2P28476 465 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 SNRPGP62308 76 aaKnown RBP17.11■□□□□ 0.33
GNE-201ENST00000377902 PIN1Q13526 163 aaPredicted RBP17.11■□□□□ 0.33
GNE-201ENST00000377902 PDE7AQ13946 482 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 NCF4Q15080 339 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 PDZK1Q5T2W1 519 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 SAXO2Q658L1 398 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 PPP2R2DQ66LE6 453 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 GAREM2Q75VX8 874 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 TMCO2Q7Z6W1 182 aaPredicted RBP17.11■□□□□ 0.33
GNE-201ENST00000377902 COMTD1Q86VU5 262 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 SCLYQ96I15 445 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 WDFY2Q96P53 400 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 TMEM175Q9BSA9 504 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 POLR2J3Q9H1A7 115 aaKnown RBP17.11■□□□□ 0.33
GNE-201ENST00000377902 RNF186Q9NXI6 227 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 GULP1Q9UBP9 304 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 TMCC3Q9ULS5 477 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 PIPSLA2A3N6 862 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 SLC35F4A4IF30 521 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 RTCAO00442 366 aaKnown RBP17.11■□□□□ 0.33
GNE-201ENST00000377902 MYL12BO14950 172 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 URODP06132 367 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 TSPAN19P0C672 248 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 CTSAP10619 480 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 ITGB7P26010 798 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 ILKQ13418 452 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 DCST1Q5T197 706 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 REEP3Q6NUK4 255 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 BRAT1Q6PJG6 821 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 ZFP41Q8N8Y5 198 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 TP53I13Q8NBR0 393 aaPredicted RBP17.11■□□□□ 0.33
GNE-201ENST00000377902 ATP6V1C2Q8NEY4 427 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 SORCS1Q8WY21 1168 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 TMEM19Q96HH6 336 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 METTL2AQ96IZ6 378 aaKnown RBP17.11■□□□□ 0.33
GNE-201ENST00000377902 CTPS2Q9NRF8 586 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 TOR4AQ9NXH8 423 aa17.11■□□□□ 0.33
GNE-201ENST00000377902 SPIN1Q9Y657 262 aaPredicted RBP17.11■□□□□ 0.33
GNE-201ENST00000377902 IQCMA0A1B0GVH7 501 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 A0A1W2PQ45 241 aaPredicted RBP17.1■□□□□ 0.33
GNE-201ENST00000377902 A0A1W2PQY0 241 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 OR6C70A6NIJ9 312 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 ERVH48-1M5A8F1 160 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 CPNE3O75131 537 aaKnown RBP17.1■□□□□ 0.33
GNE-201ENST00000377902 POP4O95707 220 aaKnown RBP17.1■□□□□ 0.33
GNE-201ENST00000377902 CHRNB1P11230 501 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 APEX1P27695 318 aaKnown RBP17.1■□□□□ 0.33
GNE-201ENST00000377902 ALDH9A1P49189 494 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms