RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 TBCCQ15814 346 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 HSPB2Q16082 182 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 HIST2H2ACQ16777 129 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 TMEM35AQ53FP2 167 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 HIST2H2AA3Q6FI13 130 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 ADGRD1Q6QNK2 874 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 LYPD8Q6UX82 237 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 ZNF793Q6ZN11 406 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 SEM1Q6ZVN7 128 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 ULK2Q8IYT8 1036 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 FBXW8Q8N3Y1 598 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 ACOT4Q8N9L9 421 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 MBD6Q96DN6 1003 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 RMND5BQ96G75 393 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 CAPZA3Q96KX2 299 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 ALPK1Q96QP1 1244 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 GPATCH1Q9BRR8 931 aaKnown RBP12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 TMEM79Q9BSE2 394 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 MCMBPQ9BTE3 642 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 DDX47Q9H0S4 455 aaKnown RBP12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 DLL4Q9NR61 685 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 QPCTLQ9NXS2 382 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 CRIM1Q9NZV1 1036 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 BOKQ9UMX3 212 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 SPACA6W5XKT8 324 aa12.06□□□□□ -0.48
TRAPPC3-201ENST00000373159 WISP3O95389 354 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 HIST1H1TP22492 207 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 CASP2P42575 452 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 KCNJ2P63252 427 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 ID2Q02363 134 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 FOXD4Q12950 439 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 SNTB1Q13884 538 aaKnown RBP12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 E2F2Q14209 437 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 DAZAP2Q15038 168 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 PAGE2BQ5JRK9 111 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 SULT1C3Q6IMI6 304 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 CDC20BQ86Y33 519 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 GPSM1Q86YR5 675 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 DND1Q8IYX4 353 aaKnown RBP12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 LRRC25Q8N386 305 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 GOT1L1Q8NHS2 421 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 NEIL3Q8TAT5 605 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 SLC22A8Q8TCC7 542 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 ZNF473Q8WTR7 871 aaKnown RBP12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 FAM222BQ8WU58 562 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 SPACA9Q96E40 222 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 RBM18Q96H35 190 aaKnown RBP12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 RUNDC3BQ96NL0 473 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 RHOJQ9H4E5 214 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 ZNF703Q9H7S9 590 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 PROK2Q9HC23 129 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 NSMCE4AQ9NXX6 385 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 WWOXQ9NZC7 414 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 CNIH4Q9P003 139 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 RPH3AQ9Y2J0 694 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 MPDZO75970 2070 aa12.05□□□□□ -0.48
TRAPPC3-201ENST00000373159 A6NNC1 897 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 AHRRA9YTQ3 701 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 DYRK3O43781 588 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 FGF17O60258 216 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 EPPINO95925 133 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 CPN2P22792 545 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 UQCRC1P31930 480 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 CEACAM8P31997 349 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 HSPA7P48741 367 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 ARL4CP56559 192 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 POU4F1Q01851 419 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 CHIT1Q13231 466 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 PDK4Q16654 411 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 AP5B1Q2VPB7 878 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 FBXL19-AS1Q494R0 122 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 FBXO48Q5FWF7 155 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 SYDE1Q6ZW31 735 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 CHSY3Q70JA7 882 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 CAMKMTQ7Z624 323 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 ANKMY2Q8IV38 441 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 OR4N5Q8IXE1 308 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 C9orf40Q8IXQ3 194 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 SPATA6LQ8N4H0 392 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 SNX31Q8N9S9 440 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 BBOF1Q8ND07 529 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 RNASE6Q93091 150 aaKnown RBP12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 UBE2E3Q969T4 207 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 ESAMQ96AP7 390 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 LRRC46Q96FV0 321 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 ART5Q96L15 291 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 DGAT2Q96PD7 388 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 SH3GL2Q99962 352 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 MS4A8Q9BY19 250 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 PHACTR1Q9C0D0 580 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 MS4A12Q9NXJ0 267 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 ZNF629Q9UEG4 869 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 FOXD3Q9UJU5 478 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 PTBP2Q9UKA9 531 aaKnown RBP12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 SNX12Q9UMY4 172 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 PLEKHA6Q9Y2H5 1048 aa12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 MTO1Q9Y2Z2 717 aaKnown RBP12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 CHCHD2Q9Y6H1 151 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC3-201ENST00000373159 DNHD1Q96M86 4753 aa12.03□□□□□ -0.48
TRAPPC3-201ENST00000373159 EML6Q6ZMW3 1958 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms