RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 NTMT1Q9BV86 223 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 CNPPD1Q9BV87 410 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 NPLQ9BXD5 320 aaPredicted RBP3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 C1QTNF3Q9BXJ4 246 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 ERVK-6Q9BXR3 956 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 EBPLQ9BY08 206 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 PARD6BQ9BYG5 372 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 DEFB126Q9BYW3 111 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 OR8D2Q9GZM6 311 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 PITHD1Q9GZP4 211 aaPredicted RBP3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 ELOVL6Q9H5J4 265 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 RPF2Q9H7B2 306 aaKnown RBP3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 ANKRA2Q9H9E1 313 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 LYRM4Q9HD34 91 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 MMP25Q9NPA2 562 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 MID1IP1Q9NPA3 183 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 ADAP2Q9NPF8 381 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 STMN3Q9NZ72 180 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 SLC17A7Q9P2U7 560 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 HEY2Q9UBP5 337 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 GIMAP2Q9UG22 337 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 TRPS1Q9UHF7 1281 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 ERRFI1Q9UJM3 462 aaPredicted RBP3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 VPS4AQ9UN37 437 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 SLC12A4Q9UP95 1085 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 ERVK-19Q9WJR5 959 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 MRPS33Q9Y291 106 aaKnown RBP3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 FIS1Q9Y3D6 152 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 MMACHCQ9Y4U1 282 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 ASB4Q9Y574 426 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 PCDHGA11Q9Y5H2 935 aa3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 TNPO3Q9Y5L0 923 aaKnown RBP3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 COPG1Q9Y678 874 aaKnown RBP3.24□□□□□ -1.89
RNU4-35P-201ENST00000362588 MAST4O15021 2626 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 DOCK7Q96N67 2140 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 CLEC18AA5D8T8 446 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 PINLYPA6NC86 204 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 FAM166BA8MTA8 275 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 TMEM233B4DJY2 109 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 NPIPA5E9PKD4 350 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 FOXE1O00358 373 aaPredicted RBP3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 CLDN4O14493 209 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 COPEO14579 308 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 PCDH17O14917 1159 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 PROM1O43490 865 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 KLHL41O60662 606 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 PRAMEF2O60811 474 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 CTNSO60931 367 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 CDH16O75309 829 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 ITGA10O75578 1167 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 ERAL1O75616 437 aaKnown RBP3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 SLC25A12O75746 678 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 OR2J2O76002 312 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 NEURL1O76050 574 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 OR6B1O95007 311 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 SEMA3DO95025 777 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 RASAL1O95294 804 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 CBX6O95503 412 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 DDAH2O95865 285 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 OTCP00480 354 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 CLPSP04118 112 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 CHRNGP07510 517 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 CYC1P08574 325 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 IL3P08700 152 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 FAM58BPP0C7Q3 252 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 ICAM2P13598 275 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 ALOX15P16050 662 aaPredicted RBP3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 KRT4P19013 534 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 IMPDH1P20839 514 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 IL10P22301 178 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 PTX3P26022 381 aaPredicted RBP3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 COL8A1P27658 744 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 SERPINB1P30740 379 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 ARRB2P32121 409 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 CRHR1P34998 444 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 SOX18P35713 384 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 FEN1P39748 380 aaKnown RBP3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 STT3AP46977 705 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 ALDH9A1P49189 494 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 MEOX1P50221 254 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 PRKAA2P54646 552 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 NAGLUP54802 743 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 RNF4P78317 190 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 RAE1P78406 368 aaKnown RBP3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 IGLV3-21P80748 117 aaPredicted RBP3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 MRPS35P82673 323 aaKnown RBP3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 NOTCH2Q04721 2471 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 SLC18A2Q05940 514 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 IFFO1Q0D2I5 559 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 TBL3Q12788 808 aaKnown RBP3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 ASPHQ12797 758 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 DUSP8Q13202 625 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 CUL3Q13618 768 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 UBAP2LQ14157 1087 aaKnown RBP3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 ZNF267Q14586 743 aaPredicted RBP3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 EXOSC7Q15024 291 aaKnown RBP3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 RASA2Q15283 850 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 ELAVL1Q15717 326 aaKnown RBP3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 LTB4RQ15722 352 aa3.23□□□□□ -1.89
RNU4-35P-201ENST00000362588 NNATQ16517 81 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms