RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 RRNAD1Q96FB5 475 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ABCG4Q9H172 646 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 MRPS30Q9NP92 439 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 RBFOX1Q9NWB1 397 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ARL5AQ9Y689 179 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 SOBPA7XYQ1 873 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 EEF1E1-BLOC1S5C9J1V9 151 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 GKN3PP0CG01 181 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 RBMXP38159 391 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 GALK2Q01415 458 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 HSPB3Q12988 150 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 CYS1Q717R9 158 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 NECTIN4Q96NY8 510 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 OR5B12Q96R08 314 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 SLAMF7Q9NQ25 335 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 PCDHB7Q9Y5E2 793 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 RHPN2P1A8MT19 583 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 MT-ND4P03905 459 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 PPP3CBP16298 524 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 RHBDL3P58872 404 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ELAVL2Q12926 359 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 CRY2Q49AN0 593 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 GTDC1Q4AE62 458 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 PAPD4Q6PIY7 484 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 DCLRE1AQ6PJP8 1040 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 SORCS1Q8WY21 1168 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 SLC35G5Q96KT7 338 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ACTL7AQ9Y615 435 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 PPP1R2P9O14990 202 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 MUSKO15146 869 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 NAT2P11245 290 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ACADMP11310 421 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 UGT2B7P16662 529 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 GGT5P36269 586 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 PAN3Q58A45 887 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF691Q5VV52 312 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ALKAL2Q6UX46 152 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 TMC8Q8IU68 726 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 TCEANCQ8N8B7 351 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF454Q8N9F8 522 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 OR5T3Q8NGG3 340 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 NTAN1Q96AB6 310 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 AKT1S1Q96B36 256 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ELP4Q96EB1 424 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 CPA4Q9UI42 421 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 PCDHGB7Q9Y5F8 929 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 SCGB1D2O95969 90 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 MT-CYBP00156 380 aaPredicted RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ADORA3P0DMS8 318 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF20P17024 532 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 RPS25P62851 125 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 CHRNA6Q15825 494 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 KCTD20Q7Z5Y7 419 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 NPAS3Q8IXF0 933 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 SLC44A3Q8N4M1 653 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 OR8D1Q8WZ84 308 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF516Q92618 1163 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 CNOT2Q9NZN8 540 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 VPS29Q9UBQ0 182 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 FMO6PO60774 539 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 CDK14O94921 469 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 RAF1P04049 648 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 RBMS1P29558 406 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 MAP3K8P41279 467 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 MC1RQ01726 317 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 HMGN3Q15651 99 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 Q3ZCU0 254 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 GXYLT1Q4G148 440 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF676Q8N7Q3 588 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 OR4F6Q8NGB9 312 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 BBS10Q8TAM1 723 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 DNASE1L2Q92874 299 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 CCM2Q9BSQ5 444 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 HOXD1Q9GZZ0 328 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 TPT1P13693 172 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ATXN1P54253 815 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF565Q8N9K5 539 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ST7LQ8TDW4 575 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 MRPS31Q92665 395 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 RPL3LQ92901 407 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 BORCS6Q96GS4 357 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ADAM2Q99965 735 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 SAP130Q9H0E3 1048 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 SLC6A17Q9H1V8 727 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 UNKLQ9H9P5 680 aaKnown RBP5.84□□□□□ -1.47
VPS13B-203ENST00000358544 ELP3Q9H9T3 547 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 OR2S2Q9NQN1 319 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 PCDHGA8Q9Y5G5 932 aa5.84□□□□□ -1.47
VPS13B-203ENST00000358544 PCDH7O60245 1069 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 SCO1O75880 301 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 CH25HO95992 272 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 GLUD1P00367 558 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 AHSGP02765 367 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 TPOP07202 933 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 HLA-DMAP28067 261 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 NADSYN1Q6IA69 706 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 NPLOC4Q8TAT6 608 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 RPL10LQ96L21 214 aaKnown RBP5.84□□□□□ -1.48
VPS13B-203ENST00000358544 SCPEP1Q9HB40 452 aa5.84□□□□□ -1.48
VPS13B-203ENST00000358544 USP21Q9UK80 565 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms