RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 REM1O75628 298 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 AP2S1P53680 142 aaPredicted RBP12.71□□□□□ -0.38
CASC4-201ENST00000299957 MBTPS1Q14703 1052 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 SMU1Q2TAY7 513 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 BHLHB9Q6PI77 547 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.71□□□□□ -0.38
CASC4-201ENST00000299957 ENTHD1Q8IYW4 607 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 OR4K5Q8NGD3 323 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 C2orf15Q8WU43 125 aaKnown RBP12.71□□□□□ -0.38
CASC4-201ENST00000299957 SLC6A16Q9GZN6 736 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 SLC22A4Q9H015 551 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 GPN2Q9H9Y4 310 aaPredicted RBP12.71□□□□□ -0.38
CASC4-201ENST00000299957 IKZF2Q9UKS7 526 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 SATB2Q9UPW6 733 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 AGAP5A6NIR3 686 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 C1QTNF3-AMACRE9PGA6 284 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 PITPNM1O00562 1244 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 SOCS5O75159 536 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 RPP14O95059 124 aaKnown RBP12.71□□□□□ -0.38
CASC4-201ENST00000299957 SOD2P04179 222 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 BTN3A2P78410 334 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 RPL6Q02878 288 aaKnown RBP12.71□□□□□ -0.38
CASC4-201ENST00000299957 GAB1Q13480 694 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 ZNF630Q2M218 657 aaPredicted RBP12.71□□□□□ -0.38
CASC4-201ENST00000299957 AKIRIN2Q53H80 203 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 KHDRBS2Q5VWX1 349 aaKnown RBP12.71□□□□□ -0.38
CASC4-201ENST00000299957 BRAT1Q6PJG6 821 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 ADGRD2Q7Z7M1 963 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 PIGXQ8TBF5 258 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 LCN9Q8WX39 176 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 SECISBP2Q96T21 854 aaKnown RBP12.71□□□□□ -0.38
CASC4-201ENST00000299957 NTMT1Q9BV86 223 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 FZD3Q9NPG1 666 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 MARCH5Q9NX47 278 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 MAPRE3Q9UPY8 281 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 MED16Q9Y2X0 877 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 UGT2A1Q9Y4X1 527 aa12.71□□□□□ -0.38
CASC4-201ENST00000299957 PTPRFP10586 1907 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 CDC123O75794 336 aaPredicted RBP12.7□□□□□ -0.38
CASC4-201ENST00000299957 FGF18O76093 207 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 PRNPP04156 253 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 CLEC2LP0C7M8 214 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 CBSLP0DN79 551 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 PTX3P26022 381 aaPredicted RBP12.7□□□□□ -0.38
CASC4-201ENST00000299957 TNFSF8P32971 234 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 CBSP35520 551 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 GABARAPL2P60520 117 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 DSC1Q08554 894 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 SLC9A5Q14940 896 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 SNAP47Q5SQN1 464 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 TPGS2Q68CL5 300 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 PAMR1Q6UXH9 720 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 ARMCX6Q7L4S7 300 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 HDDC2Q7Z4H3 204 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 LSRQ86X29 649 aaPredicted RBP12.7□□□□□ -0.38
CASC4-201ENST00000299957 NUDT13Q86X67 352 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 C16orf78Q8WTQ4 265 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 ASB11Q8WXH4 323 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 FRMD6Q96NE9 622 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 NANSQ9NR45 359 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 ZNF224Q9NZL3 707 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 LAG3P18627 525 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 RAB15P59190 212 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 LIPJQ5W064 366 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 PAQR6Q6TCH4 344 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 TMEM107Q6UX40 140 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 VITQ6UXI7 678 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 KLBQ86Z14 1044 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 CYB561A3Q8NBI2 242 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 SLC37A3Q8NCC5 494 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 OR6C4Q8NGE1 309 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 ZNF480Q8WV37 535 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 EID2BQ96D98 161 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 TRIB3Q96RU7 358 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 UHRF1Q96T88 793 aaPredicted RBP12.7□□□□□ -0.38
CASC4-201ENST00000299957 CSNK1G3Q9Y6M4 447 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 IGLV3-10A0A075B6K4 115 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 A0A1W2PQ09 198 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 CHURC1-FNTBB4DL54 471 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 TGM5O43548 720 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 NCR1O76036 304 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 GASTP01350 101 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 ACADMP11310 421 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 RPS3P23396 243 aaKnown RBP eCLIP12.7□□□□□ -0.381e-8■■■□□ 19
CASC4-201ENST00000299957 MAGEA8P43361 318 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 ARL4DP49703 201 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 SYPL1Q16563 259 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 SPATS1Q496A3 300 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 LIMS2Q7Z4I7 341 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 Q8N402 240 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 OR8K3Q8NH51 312 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 SLC46A2Q9BY10 475 aa12.7□□□□□ -0.38
CASC4-201ENST00000299957 RTTNQ86VV8 2226 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 COL5A3P25940 1745 aaPredicted RBP12.69□□□□□ -0.38
CASC4-201ENST00000299957 TRBV4-1A0A0J9YWV2 114 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 OR52A4PA6NMU1 304 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 CAPN5O15484 640 aaPredicted RBP12.69□□□□□ -0.38
CASC4-201ENST00000299957 DYRK3O43781 588 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 PRR23CQ6ZRP0 262 aa12.69□□□□□ -0.38
CASC4-201ENST00000299957 LAX1Q8IWV1 398 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms