RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 SLCO4A1Q96BD0 722 aa16.45■□□□□ 0.22
HOXC6-201ENST00000243108 LRGUKQ96M69 825 aa16.45■□□□□ 0.22
HOXC6-201ENST00000243108 OR52E6Q96RD3 313 aa16.45■□□□□ 0.22
HOXC6-201ENST00000243108 KCTD14Q9BQ13 255 aaPredicted RBP16.45■□□□□ 0.22
HOXC6-201ENST00000243108 ECSITQ9BQ95 431 aa16.45■□□□□ 0.22
HOXC6-201ENST00000243108 KLHL4Q9C0H6 718 aa16.45■□□□□ 0.22
HOXC6-201ENST00000243108 VAPAQ9P0L0 249 aa16.45■□□□□ 0.22
HOXC6-201ENST00000243108 PPT2Q9UMR5 302 aa16.45■□□□□ 0.22
HOXC6-201ENST00000243108 AP4S1Q9Y587 144 aa16.45■□□□□ 0.22
HOXC6-201ENST00000243108 SNX13Q9Y5W8 968 aa16.45■□□□□ 0.22
HOXC6-201ENST00000243108 CDC14CA4D256 554 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 ZNF839A8K0R7 811 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 J3QKU1 62 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 MEN1O00255 615 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 ARPC2O15144 300 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 SUV39H1O43463 412 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 SFTPCP11686 197 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 PCNAP12004 261 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 PKLRP30613 574 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 S100A3P33764 101 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 ACSM2AQ08AH3 577 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 DPY19L1Q2PZI1 675 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 DEFB110Q30KQ9 67 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 SPIN4Q56A73 249 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 LRIF1Q5T3J3 769 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 LPCAT4Q643R3 524 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 ACSM2BQ68CK6 577 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 MSRB3Q8IXL7 192 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 C2orf73Q8N5S3 287 aaPredicted RBP16.44■□□□□ 0.22
HOXC6-201ENST00000243108 APOBEC4Q8WW27 367 aaKnown RBP16.44■□□□□ 0.22
HOXC6-201ENST00000243108 ABHD17AQ96GS6 310 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 EGLN2Q96KS0 407 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 LRFN5Q96NI6 719 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 SERHLQ9NQF3 203 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 ZNF71Q9NQZ8 489 aaPredicted RBP16.44■□□□□ 0.22
HOXC6-201ENST00000243108 SIRT5Q9NXA8 310 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 TUBD1Q9UJT1 453 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 LRCH1Q9Y2L9 728 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 KLHL20Q9Y2M5 609 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 ASH1LQ9NR48 2969 aaKnown RBP16.44■□□□□ 0.22
HOXC6-201ENST00000243108 COL12A1Q99715 3063 aa16.44■□□□□ 0.22
HOXC6-201ENST00000243108 TNRC6AQ8NDV7 1962 aaKnown RBP16.43■□□□□ 0.22
HOXC6-201ENST00000243108 K7EM74 188 aa16.43■□□□□ 0.22
HOXC6-201ENST00000243108 ERN1O75460 977 aaKnown RBP16.43■□□□□ 0.22
HOXC6-201ENST00000243108 RPSAP08865 295 aaKnown RBP16.43■□□□□ 0.22
HOXC6-201ENST00000243108 HOXB9P17482 250 aaPredicted RBP16.43■□□□□ 0.22
HOXC6-201ENST00000243108 GRIA3P42263 894 aa16.43■□□□□ 0.22
HOXC6-201ENST00000243108 RPS13P62277 151 aaKnown RBP16.43■□□□□ 0.22
HOXC6-201ENST00000243108 RAE1P78406 368 aaKnown RBP16.43■□□□□ 0.22
HOXC6-201ENST00000243108 TSTA3Q13630 321 aaPredicted RBP16.43■□□□□ 0.22
HOXC6-201ENST00000243108 SELPLGQ14242 412 aa16.43■□□□□ 0.22
HOXC6-201ENST00000243108 HIST2H2ACQ16777 129 aaPredicted RBP16.43■□□□□ 0.22
HOXC6-201ENST00000243108 HIST2H2AA3Q6FI13 130 aa16.43■□□□□ 0.22
HOXC6-201ENST00000243108 PDSS2Q86YH6 399 aa16.43■□□□□ 0.22
HOXC6-201ENST00000243108 TMEM102Q8N9M5 508 aaPredicted RBP16.43■□□□□ 0.22
HOXC6-201ENST00000243108 UBE2E3Q969T4 207 aa16.43■□□□□ 0.22
HOXC6-201ENST00000243108 PKP2Q99959 881 aa16.43■□□□□ 0.22
HOXC6-201ENST00000243108 GPR87Q9BY21 358 aa16.43■□□□□ 0.22
HOXC6-201ENST00000243108 FAM117AQ9C073 453 aa16.43■□□□□ 0.22
HOXC6-201ENST00000243108 PAIP1Q9H074 479 aaKnown RBP16.43■□□□□ 0.22
HOXC6-201ENST00000243108 COPS7BQ9H9Q2 264 aaPredicted RBP16.43■□□□□ 0.22
HOXC6-201ENST00000243108 DMRT3Q9NQL9 472 aa16.43■□□□□ 0.22
HOXC6-201ENST00000243108 ARMC1Q9NVT9 282 aa16.43■□□□□ 0.22
HOXC6-201ENST00000243108 EGFL7Q9UHF1 273 aa16.43■□□□□ 0.22
HOXC6-201ENST00000243108 A0A096LPI6 279 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 ZNF749O43361 778 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 MYO1DO94832 1006 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 PIK3CBP42338 1070 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 RAB28P51157 221 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 THEMIS2Q5TEJ8 643 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 ZNF385CQ66K41 422 aaPredicted RBP16.42■□□□□ 0.22
HOXC6-201ENST00000243108 GALNT18Q6P9A2 607 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 TICAM1Q8IUC6 712 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 SMPDL3AQ92484 453 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 CLIP3Q96DZ5 547 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 EBPLQ9BY08 206 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 TRIM4Q9C037 500 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 SPRTNQ9H040 489 aaPredicted RBP16.42■□□□□ 0.22
HOXC6-201ENST00000243108 PCBD2Q9H0N5 130 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 SPNS1Q9H2V7 528 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 RMND5AQ9H871 391 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 FANCEQ9HB96 536 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 CCM2LQ9NUG4 571 aaPredicted RBP16.42■□□□□ 0.22
HOXC6-201ENST00000243108 SLC25A37Q9NYZ2 338 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 FARSAQ9Y285 508 aaKnown RBP16.42■□□□□ 0.22
HOXC6-201ENST00000243108 AP3M1Q9Y2T2 418 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 FLNCQ14315 2725 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 A0A0J9YY10 115 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 ISM1B1AKI9 464 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 RECKO95980 971 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 CDH1P12830 882 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 PTPN6P29350 595 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 ITGA1P56199 1179 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 MTPNP58546 118 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 SRSF11Q05519 484 aaKnown RBP16.42■□□□□ 0.22
HOXC6-201ENST00000243108 UGT8Q16880 541 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 RUNDC3AQ59EK9 446 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 FAM198BQ6UWH4 519 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 DNAJC22Q8N4W6 341 aa16.42■□□□□ 0.22
HOXC6-201ENST00000243108 C1orf52Q8N6N3 182 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms