RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 M0R233 179 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 PDCD5O14737 125 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 SIX3O95343 332 aaPredicted RBP13.01□□□□□ -0.33
GABPB1-201ENST00000220429 C1RP00736 705 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 IGHV2-70P01814 119 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 ADRB1P08588 477 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 ITGB8P26012 769 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 ALDH9A1P49189 494 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 CDKN1CP49918 316 aaPredicted RBP13.01□□□□□ -0.33
GABPB1-201ENST00000220429 CDH18Q13634 790 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 TAF1AQ15573 450 aaPredicted RBP13.01□□□□□ -0.33
GABPB1-201ENST00000220429 SNAPC1Q16533 368 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 NHLRC3Q5JS37 347 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 VASNQ6EMK4 673 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 CHPFQ8IZ52 775 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 DCBLD1Q8N8Z6 715 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 TTC29Q8NA56 475 aaPredicted RBP13.01□□□□□ -0.33
GABPB1-201ENST00000220429 SETD7Q8WTS6 366 aaKnown RBP13.01□□□□□ -0.33
GABPB1-201ENST00000220429 NXPE2Q96DL1 559 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 DIRAS2Q96HU8 199 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 CXorf58Q96LI9 332 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 OR5M11Q96RB7 305 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 ATOH8Q96SQ7 321 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 SLC29A3Q9BZD2 475 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 MIOXQ9UGB7 285 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 LIMD1Q9UGP4 676 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 RPS6KA6Q9UK32 745 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 RAI2Q9Y5P3 530 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 TCRBV16S1A1N1A0A5B0 115 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 ARGFXA6NJG6 315 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 LYRM1O43325 122 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 AKAP8O43823 692 aaKnown RBP13.01□□□□□ -0.33
GABPB1-201ENST00000220429 EEDO75530 441 aaKnown RBP13.01□□□□□ -0.33
GABPB1-201ENST00000220429 HRGP04196 525 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 FGF2P09038 288 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 PSMA3P25788 255 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 MAPK1P28482 360 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 SSTR4P31391 388 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 SLC19A1P41440 591 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 MAN2A2P49641 1150 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 P2RY4P51582 365 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 TEAD4Q15561 434 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 MPEG1Q2M385 716 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 SPOUT1Q5T280 376 aaKnown RBP13.01□□□□□ -0.33
GABPB1-201ENST00000220429 SLC25A25Q6KCM7 469 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 AFTPHQ6ULP2 937 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 LINGO4Q6UY18 593 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 BVESQ8NE79 360 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 APH1BQ8WW43 257 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 TOX2Q96NM4 488 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 MOGAT1Q96PD6 335 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 CNPPD1Q9BV87 410 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 ABCB9Q9NP78 766 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 TRPS1Q9UHF7 1281 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 PSORS1C1Q9UIG5 152 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 LEF1Q9UJU2 399 aaPredicted RBP13.01□□□□□ -0.33
GABPB1-201ENST00000220429 FBXL2Q9UKC9 423 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 NDRG2Q9UN36 371 aaKnown RBP13.01□□□□□ -0.33
GABPB1-201ENST00000220429 FAM50BQ9Y247 325 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 BTRCQ9Y297 605 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 NCKAP1Q9Y2A7 1128 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 ASB4Q9Y574 426 aa13.01□□□□□ -0.33
GABPB1-201ENST00000220429 HCN1O60741 890 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 FKTNO75072 461 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 POP7O75817 140 aaKnown RBP13□□□□□ -0.33
GABPB1-201ENST00000220429 PTHP01270 115 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 RLN2P04090 185 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 ANXA3P12429 323 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 SYN1P17600 705 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 CTPS1P17812 591 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 ATP12AP54707 1039 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 SH3BP2P78314 561 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 CCINQ13939 588 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 ZNF528Q3MIS6 628 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 KLHL22Q53GT1 634 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 TRIQKQ629K1 86 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 PAQR3Q6TCH7 311 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 RHEBL1Q8TAI7 183 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 GTF3AQ92664 365 aaKnown RBP13□□□□□ -0.33
GABPB1-201ENST00000220429 RAB7BQ96AH8 199 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 DEFB118Q96PH6 123 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 CYP2S1Q96SQ9 504 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 IKZF3Q9UKT9 509 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 PADI2Q9Y2J8 665 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 SOD2P04179 222 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 RAB3BP20337 219 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 ACADLP28330 430 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 RCAN2Q14206 197 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 PSAPL1Q6NUJ1 521 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 CCDC71Q8IV32 467 aaPredicted RBP13□□□□□ -0.33
GABPB1-201ENST00000220429 PIANPQ8IYJ0 282 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 ENTHD1Q8IYW4 607 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 ISG20Q96AZ6 181 aaKnown RBP13□□□□□ -0.33
GABPB1-201ENST00000220429 RHBDF1Q96CC6 855 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 C11orf24Q96F05 449 aaPredicted RBP13□□□□□ -0.33
GABPB1-201ENST00000220429 TREX2Q9BQ50 279 aaPredicted RBP13□□□□□ -0.33
GABPB1-201ENST00000220429 TFB2MQ9H5Q4 396 aaKnown RBP13□□□□□ -0.33
GABPB1-201ENST00000220429 CDCP1Q9H5V8 836 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 SNTG1Q9NSN8 517 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 MALT1Q9UDY8 824 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms