RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 EQTNQ9NQ60 294 aa5.86□□□□□ -1.47
VPS13D-201ENST00000011700 PIH1D1Q9NWS0 290 aaKnown RBP5.86□□□□□ -1.47
VPS13D-201ENST00000011700 TAS2R14Q9NYV8 317 aa5.86□□□□□ -1.47
VPS13D-201ENST00000011700 TP53TG5Q9Y2B4 290 aa5.86□□□□□ -1.47
VPS13D-201ENST00000011700 OR51F1A6NGY5 319 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 NFKBIEO00221 500 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 SLC2A5P22732 501 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 MAGEA6P43360 314 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 RIDAP52758 137 aaKnown RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 RPS15AP62244 130 aaKnown RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 PDGFRLQ15198 375 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 FAM205BPQ63HN1 556 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 TSSK3Q96PN8 268 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 DPEP2Q9H4A9 486 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 C11orf16Q9NQ32 467 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 MRC1P22897 1456 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 TGFB1P01137 390 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 SPATA31D3P0C874 917 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 SCAPQ12770 1279 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 EOGTQ5NDL2 527 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 SPATA31D4Q6ZUB0 917 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 KBTBD6Q86V97 674 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 SATL1Q86VE3 508 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 LRRC28Q86X40 367 aaPredicted RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 TSEN2Q8NCE0 465 aaKnown RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 OR7D4Q8NG98 312 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 HPSE2Q8WWQ2 592 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 ASB17Q8WXJ9 295 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 HERVK_113Q902F9 699 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 LIN37Q96GY3 246 aaPredicted RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 TSSK2Q96PF2 358 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 SPOCK3Q9BQ16 436 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 NPLQ9BXD5 320 aaPredicted RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 DUS2Q9NX74 493 aaKnown RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 SUSD2Q9UGT4 822 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 C4AP0C0L4 1744 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 C4BP0C0L5 1744 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 ARFGEF1Q9Y6D6 1849 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 A0A0D9SG52 128 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 OR6C6A6NF89 314 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 A8MVM7 634 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 OR2B3O76000 313 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 MCCD1P59942 119 aaPredicted RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 ARHGAP19Q14CB8 494 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 ZNF792Q3KQV3 632 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 DPY19L2P1Q6NXN4 242 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 TMIGD1Q6UXZ0 262 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 RFPL4BQ6ZWI9 263 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 SERPINA9Q86WD7 417 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 OR56B2PQ8NGI1 322 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 ZNF417Q8TAU3 575 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 TRMT10AQ8TBZ6 339 aaKnown RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 ADAMTS19Q8TE59 1207 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 ADAD1Q96M93 576 aaKnown RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 MRPL45Q9BRJ2 306 aaKnown RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 TTYH3Q9C0H2 523 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 ADAM7Q9H2U9 754 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 SEC61A2Q9H9S3 476 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 RIMKLBQ9ULI2 386 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 GBF1Q92538 1859 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 TSPAN6O43657 245 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 MED6O75586 246 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 SELPP16109 830 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 GALK1P51570 392 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 PCDH1Q08174 1060 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 PPP1R26Q5T8A7 1209 aaPredicted RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 AQP11Q8NBQ7 271 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 OR2AP1Q8NGE2 309 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 SLC5A11Q8WWX8 675 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 CNOT9Q92600 299 aaKnown RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 PKP4Q99569 1192 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 GPR21Q99679 349 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 TMEM175Q9BSA9 504 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 CWH43Q9H720 699 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 U3KQV3 271 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 WNK1Q9H4A3 2382 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 MMP3P08254 477 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 HLA-EP13747 358 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 LILRA4P59901 499 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 GALK2Q01415 458 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 RCAN2Q14206 197 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 RHBDF2Q6PJF5 856 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 MUL1Q969V5 352 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 RANBP9Q96S59 729 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 CEP41Q9BYV8 373 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 COMMD3Q9UBI1 195 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 PARP14Q460N5 1801 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 DOCK1Q14185 1865 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 A6NIZ1 184 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 ACTL6BO94805 426 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 UBBP0CG47 229 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 FECHP22830 423 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 PBX1P40424 430 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 RAP1BP61224 184 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 RAP2BP61225 183 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 RAP1AP62834 184 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 RPS27AP62979 156 aaKnown RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 UBA52P62987 128 aaKnown RBP5.85□□□□□ -1.47
VPS13D-201ENST00000011700 SGCBQ16585 318 aa5.85□□□□□ -1.47
VPS13D-201ENST00000011700 SLC6A19Q695T7 634 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms