RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Pebp1P70296 187 aaKnown RBP15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 PrtgQ2EY15 1191 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Tstd2Q3U269 495 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Syt16Q7TN83 639 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 1700001K19RikQ80ZT1 219 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Slitrk5Q810B7 957 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ccdc126Q8BIS8 140 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Slitrk6Q8C110 840 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Cers6Q8C172 384 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Med19Q8C1S0 244 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Defb35Q8R2I3 63 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Eif3mQ99JX4 374 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Cstf3Q99LI7 717 aaKnown RBP15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Acsl4Q9QUJ7 711 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Slc25a13Q9QXX4 676 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 PfkpQ9WUA3 784 aaKnown RBP15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Cldn9Q9Z0S7 217 aa15.52■□□□□ 0.07
Trim28-201ENSMUST00000005705 Trmt1lA2RSY6 728 aaKnown RBP15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 HgdO09173 445 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Cdk18Q04899 451 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Fezf1Q0VDQ9 475 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 A1bgQ19LI2 512 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ccdc177Q3UHB8 706 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Syndig1lQ3USQ7 237 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Rapgefl1Q68EF8 662 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Pkp4Q68FH0 1190 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Lrrtm2Q8BGA3 515 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 CptpQ8BS40 216 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gpr26Q8BZA7 337 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Sidt2Q8CIF6 832 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr1417Q8VGJ6 315 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Uqcrc2Q9DB77 453 aaKnown RBP15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Vwa8Q8CC88 1905 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gm5141A0A0J9YUW3 581 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr396-ps1A0A0U1RNF5 211 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gm44973A0A140LJJ1 189 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gm20547B8JJN0 1276 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr549E9Q542 316 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gm5861F6VCN9 180 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 4933402N22RikF7D1B3 190 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Stmn3O70166 180 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 CfbP04186 761 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Atp1b2P14231 290 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ppm1bP36993 390 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Snrpd2P62317 118 aaKnown RBP15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 C1rbQ8CFG9 706 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Zfand2bQ91X58 257 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Cyp4f15Q99N18 534 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Znf524Q9D0B1 321 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Get4Q9D1H7 327 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Dusp6Q9DBB1 381 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Dgat1Q9Z2A7 498 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Trpm6Q8CIR4 2028 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Malrd1A2AJX4 2123 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Adam34A2RSG8 714 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Vmn1r77E9PY60 306 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ap1arE9PYF7 298 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 AboP38649 332 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Atp6v1e1P50518 226 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Slc17a4Q5NCM1 492 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Taar8aQ5QD07 344 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr12Q60894 333 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Ggt1Q60928 568 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 PtprjQ64455 1238 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Oog2Q7TPX8 476 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Znf516Q7TSH3 1157 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Itih5Q8BJD1 952 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Tspan9Q8BJU2 239 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Arhgap22Q8BL80 702 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Wdr74Q8VCG3 384 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Mlc1Q8VHK5 382 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Sec23bQ9D662 767 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Slc35a2Q9R0M8 390 aa15.51■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gm4775F7ANJ3 135 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Chrnb1P09690 501 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gbx2P48031 348 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Snrpd1P62315 119 aaKnown RBP15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 QrfprP83861 433 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 CamkmtQ3U2J5 323 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Serpinf2Q61247 491 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Smad2Q62432 467 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Cadm2Q8BLQ9 435 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Map2k7Q8CE90 535 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 FbrsQ8R089 466 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Olfr342Q8VGK7 312 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 BollQ924M5 281 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Pbdc1Q9D0B6 198 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Psg23Q9D2U0 471 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Psg21Q9DAV5 471 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Inpp5eQ9JII1 647 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Mid2Q9QUS6 705 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gbf1Q6DFZ1 1861 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 A0A286YCD0 109 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 CtcflA2APF3 636 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gm14147A2AQX6 640 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 PpigA2AR02 752 aaKnown RBP15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 CrnnD3YUU6 520 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Rph3aP47708 681 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 ArntP53762 791 aa15.5■□□□□ 0.07
Trim28-201ENSMUST00000005705 Gm10696Q3UTC4 357 aa15.5■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms