RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CASP9P55211 416 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 WDR5P61964 334 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 ELAVL2Q12926 359 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 ZNF385BQ569K4 471 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 LAPTM4BQ86VI4 370 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 RASGRP3Q8IV61 690 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 GPR65Q8IYL9 337 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 OR7G3Q8NG95 312 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 OR5H6Q8NGV6 325 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 SOCS4Q8WXH5 440 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 TEFMQ96QE5 360 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 ZIC5Q96T25 663 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 PHF11Q9UIL8 331 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 GSTK1Q9Y2Q3 226 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 GPSM3Q9Y4H4 160 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 DOCK3Q8IZD9 2030 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 FAAHO00519 579 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 NOS1APO75052 506 aaPredicted RBP14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 RAB36O95755 333 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 FHP07954 510 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 SLC2A2P11168 524 aaPredicted RBP14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 XKP51811 444 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 PLK5Q496M5 336 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 CCNJQ5T5M9 372 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 C22orf42Q6IC83 251 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 LYPD8Q6UX82 237 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 UNC5DQ6UXZ4 953 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 USP45Q70EL2 814 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 KLHDC8AQ8IYD2 350 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 GPR156Q8NFN8 814 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 ASZ1Q8WWH4 475 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 PPCDCQ96CD2 204 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 SCRN2Q96FV2 425 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 SGIP1Q9BQI5 828 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 SYT17Q9BSW7 474 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 RHCGQ9UBD6 479 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 EXO1Q9UQ84 846 aaKnown RBP14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 MAP4K5Q9Y4K4 846 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 ALG5Q9Y673 324 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 H3BN98 237 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 SMAD6O43541 496 aaKnown RBP14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 GSTM1P09488 218 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 HOXC5Q00444 222 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 MAB21L1Q13394 359 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 SLC25A30Q5SVS4 291 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 DCST1Q5T197 706 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 ZNF730Q6ZMV8 503 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 HUS1BQ8NHY5 278 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 WRAP53Q9BUR4 548 aaKnown RBP14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 BRD9Q9H8M2 597 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 TRIM45Q9H8W5 580 aaPredicted RBP14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 ISYNA1Q9NPH2 558 aa14.12□□□□□ -0.15
CACNA1A-220ENST00000635988 PCNTO95613 3336 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 TRBV4-1A0A0J9YWV2 114 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 A0A0X1KG70 313 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 A0A1W2PQ72 361 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 IRGMA1A4Y4 181 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 ZSCAN5BA6NJL1 495 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 C12orf71A8MTZ7 269 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 ZNF197O14709 1029 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 SLC30A4O14863 429 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 ORC5O43913 435 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 SLC43A1O75387 559 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 NR2F6P10588 404 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 PSKH1P11801 424 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 ZNF8P17098 575 aaPredicted RBP14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 GKP32189 559 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 STK19P49842 368 aaPredicted RBP14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 SMIM11AP58511 58 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 NAE1Q13564 534 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 PDE7AQ13946 482 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 SLC5A12Q1EHB4 618 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 BTBD16Q32M84 506 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 LEXMQ3ZCV2 418 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 ESCO2Q56NI9 601 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 REEP3Q6NUK4 255 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 FUT10Q6P4F1 479 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 AGTRAPQ6RW13 159 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 PAMR1Q6UXH9 720 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 FAM26EQ8N5C1 309 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 PLA2G15Q8NCC3 412 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 ATP6V1C2Q8NEY4 427 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 BHMTQ93088 406 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 MTERF3Q96E29 417 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 SLC6A18Q96N87 628 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 POLR2J3Q9H1A7 115 aaKnown RBP14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 ATP13A2Q9NQ11 1180 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 NDRG2Q9UN36 371 aaKnown RBP14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 PCDHB7Q9Y5E2 793 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 FAM240BA0A1B0GVZ2 78 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 OR10H3O60404 316 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 CLEC2LP0C7M8 214 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 MYL12AP19105 171 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 CLDN20P56880 219 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 DSTNP60981 165 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 ANGPT1Q15389 498 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 KLHL22Q53GT1 634 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 Q8N402 240 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms