RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 AHSPQ9NZD4 102 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 BCAP29Q9UHQ4 241 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 DSPP15924 2871 aaKnown RBP9.98□□□□□ -0.81
VPS11-208ENST00000621676 DPPA5A6NC42 116 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 BBIP1A8MTZ0 92 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 M0R3H8 397 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 KPNA4O00629 521 aaPredicted RBP9.97□□□□□ -0.81
VPS11-208ENST00000621676 PDPK1O15530 556 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 HMGN2P05204 90 aaKnown RBP9.97□□□□□ -0.81
VPS11-208ENST00000621676 CCNA2P20248 432 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 MAOAP21397 527 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 PKLRP30613 574 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 BSGP35613 385 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 AVPR1BP47901 424 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 CDH12P55289 794 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 CSTF3Q12996 717 aaKnown RBP9.97□□□□□ -0.81
VPS11-208ENST00000621676 FAM98BQ52LJ0 330 aaKnown RBP9.97□□□□□ -0.81
VPS11-208ENST00000621676 SPIN4Q56A73 249 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 LCTLQ6UWM7 567 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 C16orf47Q6ZP98 133 aaPredicted RBP9.97□□□□□ -0.81
VPS11-208ENST00000621676 C6orf120Q7Z4R8 191 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.97□□□□□ -0.81
VPS11-208ENST00000621676 PJA1Q8NG27 643 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 UTP15Q8TED0 518 aaKnown RBP9.97□□□□□ -0.81
VPS11-208ENST00000621676 PIK3R3Q92569 461 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 VNN3Q9NY84 501 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 ACTR3BQ9P1U1 418 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 RIMS3Q9UJD0 308 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 TMCO1Q9UM00 188 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 SAMHD1Q9Y3Z3 626 aaKnown RBP9.97□□□□□ -0.81
VPS11-208ENST00000621676 OTOGLQ3ZCN5 2332 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 C17orf51A8MQB3 221 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 METTL12A8MUP2 240 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 AQP9O43315 295 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 FCMRO60667 390 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 KCNK5O95279 499 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 HIST1H1TP22492 207 aaPredicted RBP9.97□□□□□ -0.81
VPS11-208ENST00000621676 ADSLP30566 484 aaPredicted RBP9.97□□□□□ -0.81
VPS11-208ENST00000621676 IDH2P48735 452 aaKnown RBP9.97□□□□□ -0.81
VPS11-208ENST00000621676 RUNX2Q13950 521 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 HEPACAMQ14CZ8 416 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 PDK3Q15120 406 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 RGNQ15493 299 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 TMEM236Q5W0B7 351 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 TMEM26Q6ZUK4 368 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 EPHX4Q8IUS5 362 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 PRR22Q8IZ63 422 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 CSNK1A1LQ8N752 337 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 ZNF548Q8NEK5 533 aaPredicted RBP9.97□□□□□ -0.81
VPS11-208ENST00000621676 DNASE1L2Q92874 299 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 TIMM29Q9BSF4 260 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 GLIPR2Q9H4G4 154 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 SUCOQ9UBS9 1254 aaKnown RBP9.97□□□□□ -0.81
VPS11-208ENST00000621676 FANCMQ8IYD8 2048 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 TEX51A0A1B0GUA7 166 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 LAMTOR5O43504 91 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 SCN2BO60939 215 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 UBXN7O94888 489 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 APOL3O95236 402 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 IL7RP16871 459 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 ELK4P28324 431 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 KLC1Q07866 573 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 LEXMQ3ZCV2 418 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 VWA2Q5GFL6 755 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 ASPGQ86U10 573 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 PMEPA1Q969W9 287 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 KCNH6Q9H252 994 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 CXorf56Q9H5V9 222 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 FBXO34Q9NWN3 711 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 TAS2R9Q9NYW1 312 aa9.97□□□□□ -0.81
VPS11-208ENST00000621676 PCNX2A6NKB5 2137 aa9.96□□□□□ -0.81
VPS11-208ENST00000621676 APC2O95996 2303 aa9.96□□□□□ -0.81
VPS11-208ENST00000621676 MED26O95402 600 aa9.96□□□□□ -0.81
VPS11-208ENST00000621676 IGFBP1P08833 259 aaPredicted RBP9.96□□□□□ -0.81
VPS11-208ENST00000621676 CXCR2P25025 360 aa9.96□□□□□ -0.81
VPS11-208ENST00000621676 ATP5A1P25705 553 aaKnown RBP9.96□□□□□ -0.81
VPS11-208ENST00000621676 RPA4Q13156 261 aa9.96□□□□□ -0.81
VPS11-208ENST00000621676 PHF19Q5T6S3 580 aa9.96□□□□□ -0.81
VPS11-208ENST00000621676 RIMKLAQ8IXN7 391 aa9.96□□□□□ -0.81
VPS11-208ENST00000621676 METTL4Q8N3J2 472 aa9.96□□□□□ -0.81
VPS11-208ENST00000621676 TMEM102Q8N9M5 508 aaPredicted RBP9.96□□□□□ -0.81
VPS11-208ENST00000621676 PHF12Q96QT6 1004 aa9.96□□□□□ -0.81
VPS11-208ENST00000621676 CCT7Q99832 543 aa9.96□□□□□ -0.81
VPS11-208ENST00000621676 ROGDIQ9GZN7 287 aa9.96□□□□□ -0.81
VPS11-208ENST00000621676 PDP1Q9P0J1 537 aaPredicted RBP9.96□□□□□ -0.81
VPS11-208ENST00000621676 NEUROG3Q9Y4Z2 214 aa9.96□□□□□ -0.81
VPS11-208ENST00000621676 OR10H2O60403 315 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 ATP6V1C1P21283 382 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 SLC7A1P30825 629 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 KDELR2P33947 212 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 SHMT2P34897 504 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 PIN1Q13526 163 aaPredicted RBP9.96□□□□□ -0.82
VPS11-208ENST00000621676 SCARB2Q14108 478 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 VMACQ2NL98 169 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.96□□□□□ -0.82
VPS11-208ENST00000621676 MLIPQ5VWP3 458 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 ABHD17CQ6PCB6 329 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 ADHFE1Q8IWW8 467 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 SLC25A45Q8N413 288 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 SLC16A11Q8NCK7 471 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 487.7 ms