RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 GALNT16Q8N428 558 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 CSGALNACT2Q8N6G5 542 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 TTC9BQ8N6N2 239 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 BPIFCQ8NFQ6 507 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 RDM1Q8NG50 284 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 LARP4BQ92615 738 aaKnown RBP3.95□□□□□ -1.78
LINC00649-204ENST00000593977 KIAA1143Q96AT1 154 aaPredicted RBP3.95□□□□□ -1.78
LINC00649-204ENST00000593977 ISG20Q96AZ6 181 aaKnown RBP3.95□□□□□ -1.78
LINC00649-204ENST00000593977 ULK4Q96C45 1275 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 ZC3HAV1LQ96H79 300 aaKnown RBP3.95□□□□□ -1.78
LINC00649-204ENST00000593977 HARBI1Q96MB7 349 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 SLITRK1Q96PX8 696 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 TEFMQ96QE5 360 aaKnown RBP3.95□□□□□ -1.78
LINC00649-204ENST00000593977 ACOX2Q99424 681 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 SEPHS2Q99611 448 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 C11orf70Q9BRQ4 267 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 LLPHQ9BRT6 129 aaKnown RBP3.95□□□□□ -1.78
LINC00649-204ENST00000593977 ABHD14AQ9BUJ0 271 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 ALG12Q9BV10 488 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 NUP58Q9BVL2 599 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 NMNAT2Q9BZQ4 307 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 MAGT1Q9H0U3 335 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 CUEDC2Q9H467 287 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 MVB12BQ9H7P6 319 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 CALHM2Q9HA72 323 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 UPF2Q9HAU5 1272 aaKnown RBP3.95□□□□□ -1.78
LINC00649-204ENST00000593977 GALNT9Q9HCQ5 603 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 HEBP1Q9NRV9 189 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 RNF146Q9NTX7 359 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 TMEM74BQ9NUR3 256 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 RDH8Q9NYR8 311 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 TRPM5Q9NZQ8 1165 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 STK39Q9UEW8 545 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 SERGEFQ9UGK8 458 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 NDRG2Q9UN36 371 aaKnown RBP3.95□□□□□ -1.78
LINC00649-204ENST00000593977 ZFR2Q9UPR6 939 aaKnown RBP3.95□□□□□ -1.78
LINC00649-204ENST00000593977 CHMP2BQ9UQN3 213 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 MRPS33Q9Y291 106 aaKnown RBP3.95□□□□□ -1.78
LINC00649-204ENST00000593977 ZNF510Q9Y2H8 683 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 PADI2Q9Y2J8 665 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 NOX1Q9Y5S8 564 aa3.95□□□□□ -1.78
LINC00649-204ENST00000593977 SF3B1O75533 1304 aaKnown RBP eCLIP3.95□□□□□ -1.78
LINC00649-204ENST00000593977 COL6A5A8TX70 2615 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 RP1L1Q8IWN7 2480 aaPredicted RBP3.94□□□□□ -1.78
LINC00649-204ENST00000593977 LAMA4Q16363 1823 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 TRGV11A0A075B6L2 103 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 TTC26A0AVF1 554 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 ILVBLA1L0T0 632 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 TMEM89A2RUT3 159 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 FAM149AA5PLN7 773 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 ANKUB1A6NFN9 424 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 MARCH11A6NNE9 402 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 HEPACAM2A8MVW5 462 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 BECN2A8MW95 431 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 FAM157AC9JC47 383 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 H3BMM5 538 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 K7ERQ8 282 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 CES2O00748 559 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 RRP8O43159 456 aaKnown RBP3.94□□□□□ -1.78
LINC00649-204ENST00000593977 ZNF208O43345 1280 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 GRID2O43424 1007 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 SUV39H1O43463 412 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 PLPP2O43688 288 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 TMPRSS11DO60235 418 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 OR6A2O95222 327 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 LGI1O95970 557 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 HLA-DQA2P01906 255 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 FHP07954 510 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 ZNF286BP0CG31 522 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 NR2F6P10588 404 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 ETFAP13804 333 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 INSRRP14616 1297 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 SRD5A1P18405 259 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 GATA3P23771 443 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 MPZP25189 248 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 PIK3R1P27986 724 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 FCGR2BP31994 310 aaPredicted RBP3.94□□□□□ -1.78
LINC00649-204ENST00000593977 DLSTP36957 453 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 IER3P46695 156 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 FMO5P49326 533 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 CXCR3P49682 368 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 RGS4P49798 205 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 PLTPP55058 493 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 MTCP1P56278 107 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 GSDMDP57764 484 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 NOP14P78316 857 aaKnown RBP3.94□□□□□ -1.78
LINC00649-204ENST00000593977 DLK1P80370 383 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 XIAPP98170 497 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 E2F1Q01094 437 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 MGAT3Q09327 533 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 FUT7Q11130 342 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 TRIP6Q15654 476 aaKnown RBP3.94□□□□□ -1.78
LINC00649-204ENST00000593977 TPD52L1Q16890 204 aaPredicted RBP3.94□□□□□ -1.78
LINC00649-204ENST00000593977 ADPRMQ3LIE5 342 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 TMEM268Q5VZI3 342 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 KIAA1161Q6NSJ0 714 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 BTNL8Q6UX41 500 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 PAQR9Q6ZVX9 377 aa3.94□□□□□ -1.78
LINC00649-204ENST00000593977 MEPCEQ7L2J0 689 aaKnown RBP3.94□□□□□ -1.78
LINC00649-204ENST00000593977 TRMT11Q7Z4G4 463 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms