RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 RAB42Q8N4Z0 105 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 WDTC1Q8N5D0 677 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 ARL6IP6Q8N6S5 226 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 OR5AP2Q8NGF4 316 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 OR1J1Q8NGS3 322 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 OR4C3Q8NH37 302 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 GTF3AQ92664 365 aaKnown RBP2.33□□□□□ -2.04
VAPA-208ENST00000584796 FGF13Q92913 245 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 SGK494Q96LW2 274 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 TSPAN18Q96SJ8 248 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 RAB11FIP5Q9BXF6 653 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 TEX12Q9BXU0 123 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 TRIM4Q9C037 500 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 WWTR1Q9GZV5 400 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 NT5C3AQ9H0P0 336 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 SLA2Q9H6Q3 261 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 POLR1BQ9H9Y6 1135 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 LMAN1LQ9HAT1 526 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 ACKR4Q9NPB9 350 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 WDR35Q9P2L0 1181 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 PRG3Q9Y2Y8 225 aaPredicted RBP2.33□□□□□ -2.04
VAPA-208ENST00000584796 NAV3Q8IVL0 2385 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 SCN1AP35498 2009 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 PRRC2CQ9Y520 2896 aaKnown RBP2.32□□□□□ -2.04
VAPA-208ENST00000584796 MED13LQ71F56 2210 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 A0A1W2PN81 502 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 FAM149AA5PLN7 773 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 MEIS2O14770 477 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 CPLX1O14810 134 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 SLC7A4O43246 635 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 ADAM20O43506 726 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 BCL2L11O43521 198 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 LRP3O75074 770 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 NXPH2O95156 264 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 GOSR1O95249 250 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 PIGNO95427 931 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 HIST1H2ABP04908 130 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 EIF2S1P05198 315 aaKnown RBP2.32□□□□□ -2.04
VAPA-208ENST00000584796 ATP5BP06576 529 aaKnown RBP2.32□□□□□ -2.04
VAPA-208ENST00000584796 MYBL1P10243 752 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 HIST1H2ADP20671 130 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 CHRNA7P36544 502 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 GARSP41250 739 aaKnown RBP2.32□□□□□ -2.04
VAPA-208ENST00000584796 CAPZA2P47755 286 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 PPP5CP53041 499 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 GSDMDP57764 484 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 IRX4P78413 519 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 MS4A2Q01362 244 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 GOLGA8DPQ0D2H9 430 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 NIPAL4Q0D2K0 466 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 NFATC2Q13469 925 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 MED22Q15528 200 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 HLA-BQ31612 363 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 DNAJC21Q5F1R6 531 aaKnown RBP2.32□□□□□ -2.04
VAPA-208ENST00000584796 RAB41Q5JT25 222 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 C9orf152Q5JTZ5 239 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 C20orf194Q5TEA3 1177 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 KRT80Q6KB66 452 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 KLHL35Q6PF15 583 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 FIP1L1Q6UN15 594 aaKnown RBP2.32□□□□□ -2.04
VAPA-208ENST00000584796 PET117Q6UWS5 81 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 VITQ6UXI7 678 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 LINGO4Q6UY18 593 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 HIST3H2AQ7L7L0 130 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 LCA5Q86VQ0 697 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 ITPRIPQ8IWB1 547 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 MARVELD2Q8N4S9 558 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 TMCO5AQ8N6Q1 288 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 POGLUT1Q8NBL1 392 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 SPC24Q8NBT2 197 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 GDAP1Q8TB36 358 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 DEPDC1BQ8WUY9 529 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 ARHGAP45Q92619 1136 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 DAZLQ92904 295 aaKnown RBP2.32□□□□□ -2.04
VAPA-208ENST00000584796 ARHGEF2Q92974 986 aaKnown RBP2.32□□□□□ -2.04
VAPA-208ENST00000584796 VPS33AQ96AX1 596 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 PGAP3Q96FM1 320 aaPredicted RBP2.32□□□□□ -2.04
VAPA-208ENST00000584796 PERPQ96FX8 193 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 CCDC43Q96MW1 224 aaKnown RBP2.32□□□□□ -2.04
VAPA-208ENST00000584796 ZNF582Q96NG8 517 aaPredicted RBP2.32□□□□□ -2.04
VAPA-208ENST00000584796 GBP5Q96PP8 586 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 RAB3IPQ96QF0 476 aaPredicted RBP2.32□□□□□ -2.04
VAPA-208ENST00000584796 SPAG5Q96R06 1193 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 MYCBPQ99417 103 aaPredicted RBP2.32□□□□□ -2.04
VAPA-208ENST00000584796 SOSTQ9BQB4 213 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 APOL6Q9BWW8 343 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 FTHL17Q9BXU8 183 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 PITPNM3Q9BZ71 974 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 NAPBQ9H115 298 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 KAT14Q9H8E8 782 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 MINDY3Q9H8M7 445 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 GIMAP4Q9NUV9 329 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 CPSF2Q9P2I0 782 aaKnown RBP2.32□□□□□ -2.04
VAPA-208ENST00000584796 MAD2L2Q9UI95 211 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 ANAPC5Q9UJX4 755 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 MAN1B1Q9UKM7 699 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 CDH7Q9ULB5 785 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 CCL27Q9Y4X3 112 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 NEUROG3Q9Y4Z2 214 aa2.32□□□□□ -2.04
VAPA-208ENST00000584796 HES2Q9Y543 173 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms