RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 MKS1Q9NXB0 559 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 TEX10Q9NXF1 929 aaPredicted RBP12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 PCDHGB7Q9Y5F8 929 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 PTPN13Q12923 2485 aa12.94□□□□□ -0.34
TSPAN3-205ENST00000558745 A0A1W2PS29 197 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 PGRMC2O15173 223 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 TRIM13O60858 407 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 ULK1O75385 1050 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 MYO1DO94832 1006 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 KRT6AP02538 564 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 KRT6BP04259 564 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 IFNA16P05015 189 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 ALPPP05187 535 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 UQCRHP07919 91 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 ICAM2P13598 275 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 CASRP41180 1078 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 KRT6CP48668 564 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 PKNOX1P55347 436 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 GALNT1Q10472 559 aaPredicted RBP12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 STX4Q12846 297 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 MPP2Q14168 576 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 IGFBP7Q16270 282 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 PRR30Q53SZ7 412 aaPredicted RBP12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 CYP20A1Q6UW02 462 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 IGFL3Q6UXB1 125 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 DGAT2L6Q6ZPD8 337 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 NUDT13Q86X67 352 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 MMP21Q8N119 569 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 METTL4Q8N3J2 472 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 ZADH2Q8N4Q0 377 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 C1orf52Q8N6N3 182 aaKnown RBP12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 ZNF321PQ8N8H1 164 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 DNAJB14Q8TBM8 379 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 M1APQ8TC57 530 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 APIPQ96GX9 242 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 CNDP1Q96KN2 507 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 ACPTQ9BZG2 426 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 RPF2Q9H7B2 306 aaKnown RBP12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 ANAPC2Q9UJX6 822 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 PPT2Q9UMR5 302 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 MRPS33Q9Y291 106 aaKnown RBP12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 FIS1Q9Y3D6 152 aa12.93□□□□□ -0.34
TSPAN3-205ENST00000558745 WDR91A4D1P6 747 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 SAGE2PA6NJ88 616 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 CTIFO43310 598 aaKnown RBP12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 AIFM1O95831 613 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 WDPCPO95876 746 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 CHRNGP07510 517 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 TNNI3P19429 210 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 ARRB2P32121 409 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 TSFMP43897 325 aaKnown RBP12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 TNFRSF17Q02223 184 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 TLE1Q04724 770 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 ZNF33BQ06732 778 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 MFAP5Q13361 173 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 TNFAIP8L3Q5GJ75 292 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 CRB2Q5IJ48 1285 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 CCNYL2Q5T2Q4 361 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 CLEC6AQ6EIG7 209 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 IGFL2Q6UWQ7 119 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 COMMD6Q7Z4G1 85 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 CUZD1Q86UP6 607 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 CRLF3Q8IUI8 442 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 ELP5Q8TE02 316 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 ADAMTS18Q8TE60 1221 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 THAP3Q8WTV1 239 aaPredicted RBP12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 PTPMT1Q8WUK0 201 aaPredicted RBP12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 PKNOX2Q96KN3 472 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 SLC29A3Q9BZD2 475 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 CDCP1Q9H5V8 836 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 LIN28AQ9H9Z2 209 aaKnown RBP12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 MMP25Q9NPA2 562 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 ANKRD10Q9NXR5 420 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 STMN3Q9NZ72 180 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 PTGDR2Q9Y5Y4 395 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 SPACA6W5XKT8 324 aa12.92□□□□□ -0.34
TSPAN3-205ENST00000558745 CCDC151A5D8V7 595 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 TTLL8A6PVC2 850 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 PRKNO60260 465 aaPredicted RBP12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 ERLIN1O75477 346 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 SEMA3DO95025 777 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 ENO1P06733 434 aaKnown RBP12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 ETV4P43268 484 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 GPR143P51810 404 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 ARFIP1P53367 373 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 RAE1P78406 368 aaKnown RBP12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 FOLH1Q04609 750 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 SRSF11Q05519 484 aaKnown RBP12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 RCN2Q14257 317 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 EXT1Q16394 746 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 ZNF750Q32MQ0 723 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 CES4AQ5XG92 561 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 LRIG3Q6UXM1 1119 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 C16orf47Q6ZP98 133 aaPredicted RBP12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 BEST3Q8N1M1 668 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 CHTF18Q8WVB6 975 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 NCLNQ969V3 563 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 TM4SF18Q96CE8 201 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 C19orf60Q96EN9 201 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 LMF1Q96S06 567 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms