RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 PAQR7Q86WK9 346 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PDSS2Q86YH6 399 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 OR6N2Q8NGY6 317 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 HHIPL1Q96JK4 782 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 IL1RAPQ9NPH3 570 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TUBA8Q9NY65 449 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 GNPTGQ9UJJ9 305 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 BAIAP2Q9UQB8 552 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TCRBV7S2A1N4TA0A589 114 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 XRCC1P18887 633 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 GCH1P30793 250 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 STT3AP46977 705 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 P2RX3P56373 397 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 KCNC3Q14003 757 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 HES3Q5TGS1 186 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 FAM122CQ6P4D5 195 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 BEST3Q8N1M1 668 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ACTRT2Q8TDY3 377 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SERINC1Q9NRX5 453 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 FBXL12Q9NXK8 326 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 BARHL2Q9NY43 387 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SLC24A2Q9UI40 661 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PXDNQ92626 1479 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 FAM230AA0A1W2PPH8 454 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 OR2W5A6NFC9 320 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 FAM157AC9JC47 383 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 GRID2O43424 1007 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PAPSS2O95340 614 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 HOXB7P09629 217 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ITGAMP11215 1152 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CD247P20963 164 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 AKR1C2P52895 323 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 UBE2NP61088 152 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 MAT1AQ00266 395 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TLE1Q04724 770 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 LIPEQ05469 1076 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 MERTKQ12866 999 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 LRIT3Q3SXY7 679 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 WDR45BQ5MNZ6 344 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 MBLAC2Q68D91 279 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF782Q6ZMW2 699 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 QSOX2Q6ZRP7 698 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 USP45Q70EL2 814 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TTC9BQ8N6N2 239 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 BBS1Q8NFJ9 593 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 HMCESQ96FZ2 354 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 NODALQ96S42 347 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 RDH14Q9HBH5 336 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 OSGIN2Q9Y236 505 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 REXO2Q9Y3B8 237 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 NEXMIFQ5QGS0 1516 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 IGSF9BQ9UPX0 1349 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PPLO60437 1756 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ANKRD66B4E2M5 251 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CDC7O00311 574 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 AKR1C4P17516 323 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SLC11A1P49279 550 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ZCCHC14Q8WYQ9 949 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 APBB2Q92870 758 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SLC25A18Q9H1K4 315 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SOX17Q9H6I2 414 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 UNKLQ9H9P5 680 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CLK4Q9HAZ1 481 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 NMRAL1Q9HBL8 299 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 RNF215Q9Y6U7 377 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 F5H5K5 113 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SIM1P81133 766 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ECT2LQ008S8 904 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 DPYSQ14117 519 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF468Q5VIY5 522 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 REM2Q8IYK8 340 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 LPGAT1Q92604 370 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CCDC74AQ96AQ1 378 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PTCHD1Q96NR3 888 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 RTFDC1Q9BY42 306 aaPredicted RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CPEB1Q9BZB8 566 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TWSG1Q9GZX9 223 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PRDM8Q9NQV8 689 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 VDAC3Q9Y277 283 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SHISA7A6NL88 538 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PIAS2O75928 621 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 IFNGP01579 166 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 NDUFB7P17568 137 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ATF6P18850 670 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 CAPGP40121 348 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 EDDM3BP56851 147 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 SLC18A2Q05940 514 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ENPP2Q13822 863 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 KYAT1Q16773 422 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ANXA8L1Q5VT79 327 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PIGXQ8TBF5 258 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 DCLK3Q9C098 648 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 TDP1Q9NUW8 608 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 OR12D3Q9UGF7 316 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 C9orf172C9J069 976 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 PCDH17O14917 1159 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 POLR2HP52434 150 aaKnown RBP3.18□□□□□ -1.9
SYNE2-212ENST00000554584 WNT3AP56704 352 aa3.18□□□□□ -1.9
SYNE2-212ENST00000554584 ELAVL2Q12926 359 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms