RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 CEACAM5P06731 702 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 SFSWAPQ12872 951 aaKnown RBP10.8□□□□□ -0.68
CLK4-206ENST00000520878 RPE65Q16518 533 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 CTU2Q2VPK5 515 aaKnown RBP10.8□□□□□ -0.68
CLK4-206ENST00000520878 PTCHD4Q6ZW05 846 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 MEX3DQ86XN8 651 aaKnown RBP10.8□□□□□ -0.68
CLK4-206ENST00000520878 KCT2Q8NC54 265 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 FAM46DQ8NEK8 389 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 LINC00615Q96LM1 132 aaPredicted RBP10.8□□□□□ -0.68
CLK4-206ENST00000520878 ALPK1Q96QP1 1244 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 MBOAT4Q96T53 435 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 RHBDL2Q9NX52 303 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 OBP2AQ9NY56 170 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 TBC1D29Q9UFV1 150 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 ATP6V1HQ9UI12 483 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 SCN3AQ9NY46 2000 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 PRSS38A1L453 326 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 OR6C74A6NCV1 312 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 PCDH17O14917 1159 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 PRAMEF10O60809 474 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 ATE1O95260 518 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 SLC35G6P0C7Q6 338 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 PVRP15151 417 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 MATN1P21941 496 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 CPN2P22792 545 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 PCGF2P35227 344 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 ENTPD1P49961 510 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 FADDQ13158 208 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 SYPL1Q16563 259 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 DUSP7Q16829 419 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 DCST1Q5T197 706 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 C10orf62Q5T681 223 aaPredicted RBP10.8□□□□□ -0.68
CLK4-206ENST00000520878 IRAK1BP1Q5VVH5 260 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 SPARTQ8N0X7 666 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 OR1E3Q8WZA6 343 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 RNF31Q96EP0 1072 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 WDR92Q96MX6 357 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 RDH12Q96NR8 316 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 COPS4Q9BT78 406 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 OR51I1Q9H343 314 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 ADAP2Q9NPF8 381 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 DNAAF2Q9NVR5 837 aaKnown RBP10.8□□□□□ -0.68
CLK4-206ENST00000520878 TUBA8Q9NY65 449 aaPredicted RBP10.8□□□□□ -0.68
CLK4-206ENST00000520878 SPTBP11277 2137 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 TANC1Q9C0D5 1861 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 HAT1O14929 419 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 CYP7B1O75881 506 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 ATP6V1E1P36543 226 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 RXRGP48443 463 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 TFF2Q03403 129 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 TARDBPQ13148 414 aaKnown RBP eCLIP10.8□□□□□ -0.68
CLK4-206ENST00000520878 ARHGAP19Q14CB8 494 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 CASP12Q6UXS9 341 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 PARGQ86W56 976 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 SYNPOQ8N3V7 929 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 ACOT4Q8N9L9 421 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 FBXO15Q8NCQ5 510 aaPredicted RBP10.8□□□□□ -0.68
CLK4-206ENST00000520878 ADAMTS15Q8TE58 950 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 POP5Q969H6 163 aaKnown RBP10.8□□□□□ -0.68
CLK4-206ENST00000520878 METTL2AQ96IZ6 378 aaKnown RBP10.8□□□□□ -0.68
CLK4-206ENST00000520878 RHNO1Q9BSD3 238 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 YTHDF1Q9BYJ9 559 aaKnown RBP10.8□□□□□ -0.68
CLK4-206ENST00000520878 TPSD1Q9BZJ3 242 aa10.8□□□□□ -0.68
CLK4-206ENST00000520878 PGRMC2O15173 223 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 MT-ND2P03891 347 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 CHRM5P08912 532 aaPredicted RBP10.79□□□□□ -0.68
CLK4-206ENST00000520878 CSNK2A2P19784 350 aaPredicted RBP10.79□□□□□ -0.68
CLK4-206ENST00000520878 CDC42P60953 191 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 SIM1P81133 766 aaPredicted RBP10.79□□□□□ -0.68
CLK4-206ENST00000520878 C18orf63Q68DL7 685 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 KIAA1161Q6NSJ0 714 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 GALNT18Q6P9A2 607 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 FBXL6Q8N531 539 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 TMCO5AQ8N6Q1 288 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 RERGQ96A58 199 aaPredicted RBP10.79□□□□□ -0.68
CLK4-206ENST00000520878 ZNF347Q96SE7 839 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 QRSL1Q9H0R6 528 aaKnown RBP10.79□□□□□ -0.68
CLK4-206ENST00000520878 NEUROD4Q9HD90 331 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 SLC35C2Q9NQQ7 365 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 RLIMQ9NVW2 624 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 HCN2Q9UL51 889 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 NEUROG3Q9Y4Z2 214 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 DOCK9Q9BZ29 2069 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 FRS3O43559 492 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 PRSS23O95084 383 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 COL9A1P20849 921 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 BCL6P41182 706 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 AVPR1BP47901 424 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 ALDH3B2P48448 385 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 ANXA11P50995 505 aaKnown RBP10.79□□□□□ -0.68
CLK4-206ENST00000520878 STXBP1P61764 594 aaKnown RBP10.79□□□□□ -0.68
CLK4-206ENST00000520878 ATP1A4Q13733 1029 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 MED22Q15528 200 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 MLF2Q15773 248 aaPredicted RBP10.79□□□□□ -0.68
CLK4-206ENST00000520878 SLC38A5Q8WUX1 472 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 ELSPBP1Q96BH3 223 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 COX14Q96I36 57 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 ZNF300Q96RE9 604 aaPredicted RBP10.79□□□□□ -0.68
CLK4-206ENST00000520878 GPR174Q9BXC1 333 aa10.79□□□□□ -0.68
CLK4-206ENST00000520878 RAB11FIP5Q9BXF6 653 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms