RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 LRTM2Q8N967 370 aa3.15□□□□□ -1.91
HDAC2-208ENST00000520746 OR6S1Q8NH40 331 aa3.15□□□□□ -1.91
HDAC2-208ENST00000520746 OCC1Q8TAD7 63 aa3.15□□□□□ -1.91
HDAC2-208ENST00000520746 MAPK15Q8TD08 544 aa3.15□□□□□ -1.91
HDAC2-208ENST00000520746 ST6GALNAC6Q969X2 333 aa3.15□□□□□ -1.91
HDAC2-208ENST00000520746 BTBD9Q96Q07 612 aa3.15□□□□□ -1.91
HDAC2-208ENST00000520746 INTS14Q96SY0 518 aa3.15□□□□□ -1.91
HDAC2-208ENST00000520746 CDCA3Q99618 268 aaPredicted RBP3.15□□□□□ -1.91
HDAC2-208ENST00000520746 INPP5KQ9BT40 448 aa3.15□□□□□ -1.91
HDAC2-208ENST00000520746 THUMPD3Q9BV44 507 aaKnown RBP3.15□□□□□ -1.91
HDAC2-208ENST00000520746 RNF121Q9H920 327 aa3.15□□□□□ -1.91
HDAC2-208ENST00000520746 BARHL2Q9NY43 387 aa3.15□□□□□ -1.91
HDAC2-208ENST00000520746 EXOGQ9Y2C4 368 aaKnown RBP3.15□□□□□ -1.91
HDAC2-208ENST00000520746 ASTN1O14525 1302 aa3.15□□□□□ -1.91
HDAC2-208ENST00000520746 MYH13Q9UKX3 1938 aa3.15□□□□□ -1.91
HDAC2-208ENST00000520746 TTC28Q96AY4 2481 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 A0A087WUV0 522 aaPredicted RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 C15orf61A6NNL5 157 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 RSPH10B2B2RC85 870 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 C2CD4DB7Z1M9 353 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 F8VVB4 439 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 F8VWA3 439 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 H0YAE9 185 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 CTAGE5O15320 804 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 TEX28O15482 410 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 RNF113AO15541 343 aaKnown RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 ARHGEF9O43307 516 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 ZFAND5O76080 213 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 GJB5O95377 273 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 GH1P01241 217 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 ZFYP08048 801 aaPredicted RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 RSPH10BP0C881 870 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 F3P13726 295 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 LBPP18428 481 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 TYMPP19971 482 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 SP100P23497 879 aaPredicted RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 ELAVL4P26378 380 aaKnown RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 PSMB4P28070 264 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 CTNNB1P35222 781 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 OPRL1P41146 370 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 XGP55808 180 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 CSNK2BP67870 215 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 IRX1P78414 480 aaPredicted RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 DEFB103AP81534 67 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 SGCGQ13326 291 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 TMEM132DQ14C87 1099 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 KRTAP13-3Q3SY46 172 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 USH1GQ495M9 461 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 EPC2Q52LR7 807 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 SBK1Q52WX2 424 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 TCEAL5Q5H9L2 206 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 SPOUT1Q5T280 376 aaKnown RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 WLSQ5T9L3 541 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 BSPRYQ5W0U4 402 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 FAM166AQ6J272 317 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 TTC27Q6P3X3 843 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 LEKR1Q6ZMV7 388 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 TMEM182Q6ZP80 229 aaPredicted RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 SLC24A5Q71RS6 500 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 PIGWQ7Z7B1 504 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 CROCCP3Q8IVE0 287 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 TIGD4Q8IY51 512 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 LYG1Q8N1E2 194 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 FAM89BQ8N5H3 189 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 GBP7Q8N8V2 638 aaPredicted RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 FAM133AQ8N9E0 248 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 OR4C15Q8NGM1 316 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 SLC26A7Q8TE54 656 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 AFAP1L1Q8TED9 768 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 GATAD1Q8WUU5 269 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 DEPDC1BQ8WUY9 529 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 P2RX5Q93086 422 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 MRPL38Q96DV4 380 aaKnown RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 BSCL2Q96G97 398 aaPredicted RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 GDAP1L1Q96MZ0 367 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 ZNF599Q96NL3 588 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 OPRPNQ99935 248 aaPredicted RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 CITED2Q99967 270 aaPredicted RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 NAPBQ9H115 298 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 CHMP4BQ9H444 224 aaKnown RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 VAT1LQ9HCJ6 419 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 PHPT1Q9NRX4 125 aaPredicted RBP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.14□□□□□ -1.91
HDAC2-208ENST00000520746 CYP39A1Q9NYL5 469 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 ERAP1Q9NZ08 941 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 MUTYHQ9UIF7 546 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 PRDM4Q9UKN5 801 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 A0A1B0GUL6 1792 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 LOC285556D6RIA3 1793 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 ZBED9Q6R2W3 1325 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 PLXNB2O15031 1838 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 PHIPQ8WWQ0 1821 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 CHD9Q3L8U1 2897 aa3.14□□□□□ -1.91
HDAC2-208ENST00000520746 TRBV4-1A0A0J9YWV2 114 aa3.13□□□□□ -1.91
HDAC2-208ENST00000520746 A0A1W2PR80 420 aa3.13□□□□□ -1.91
HDAC2-208ENST00000520746 TMEM150CB9EJG8 249 aa3.13□□□□□ -1.91
HDAC2-208ENST00000520746 M0R296 226 aa3.13□□□□□ -1.91
HDAC2-208ENST00000520746 FCGR3BO75015 233 aa3.13□□□□□ -1.91
HDAC2-208ENST00000520746 KRT33AO76009 404 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms