RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 S1PR3Q99500 378 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 PAIP2Q9BPZ3 127 aaKnown RBP3.21□□□□□ -1.9
CALD1-224ENST00000498254 TDRD1Q9BXT4 1180 aaKnown RBP3.21□□□□□ -1.9
CALD1-224ENST00000498254 TEX13BQ9BXU2 312 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 NACA2Q9H009 215 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 ATG10Q9H0Y0 220 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 SLC26A1Q9H2B4 701 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 CXXC4Q9H2H0 198 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 YY1AP1Q9H869 796 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 UBE2TQ9NPD8 197 aaPredicted RBP3.21□□□□□ -1.9
CALD1-224ENST00000498254 HPS4Q9NQG7 708 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 ZNF71Q9NQZ8 489 aaPredicted RBP3.21□□□□□ -1.9
CALD1-224ENST00000498254 HOMER3Q9NSC5 361 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 MED17Q9NVC6 651 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 RBM28Q9NW13 759 aaKnown RBP3.21□□□□□ -1.9
CALD1-224ENST00000498254 AATFQ9NY61 560 aaKnown RBP eCLIP3.21□□□□□ -1.9
CALD1-224ENST00000498254 MIS18AQ9NYP9 233 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 TECRQ9NZ01 308 aaKnown RBP3.21□□□□□ -1.9
CALD1-224ENST00000498254 TMOD2Q9NZR1 351 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 WDR37Q9Y2I8 494 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 C2CD2Q9Y426 696 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 NPC1L1Q9UHC9 1359 aa3.21□□□□□ -1.9
CALD1-224ENST00000498254 ABCC4O15439 1325 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 IGHV4-4A0A075B6R2 117 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 IGKV2D-30A0A075B6S6 120 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 SERINC4A6NH21 518 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 TRIM64CA6NLI5 447 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 F8WDY8 70 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 P2RX6O15547 441 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 NME2P1O60361 137 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 MAGEC1O60732 1142 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 CT45A8P0DMV1 189 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 CT45A9P0DMV2 189 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 ERVK-10P10266 1014 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 RALAP11233 206 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 GIFP27352 417 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 CASQ1P31415 396 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 FEN1P39748 380 aaKnown RBP3.2□□□□□ -1.9
CALD1-224ENST00000498254 MDH1P40925 334 aaKnown RBP3.2□□□□□ -1.9
CALD1-224ENST00000498254 ID1P41134 155 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 ACADSBP45954 432 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 LEPRP48357 1165 aaKnown RBP3.2□□□□□ -1.9
CALD1-224ENST00000498254 PAX9P55771 341 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 CSNK2BP67870 215 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 PMP22Q01453 160 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 ELP6Q0PNE2 266 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 OVGP1Q12889 678 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 IFT88Q13099 833 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 OR1C1Q15619 314 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 ZRSR1Q15695 479 aaKnown RBP3.2□□□□□ -1.9
CALD1-224ENST00000498254 ANKDD1AQ495B1 522 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 CT45A2Q5DJT8 189 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 TEX35Q5T0J7 233 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 ZNF790Q6PG37 636 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 ZNF730Q6ZMV8 503 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 Q6ZVQ6 151 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 CYP4V2Q6ZWL3 525 aaPredicted RBP3.2□□□□□ -1.9
CALD1-224ENST00000498254 HOGA1Q86XE5 327 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 CACUL1Q86Y37 369 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 DND1Q8IYX4 353 aaKnown RBP3.2□□□□□ -1.9
CALD1-224ENST00000498254 OR52B4Q8NGK2 314 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 OR6S1Q8NH40 331 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 GATAD1Q8WUU5 269 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 MRPL24Q96A35 216 aaKnown RBP3.2□□□□□ -1.9
CALD1-224ENST00000498254 AZIN2Q96A70 460 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 TMEM45BQ96B21 275 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 COG3Q96JB2 828 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 VPS39Q96JC1 886 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 MAGED4Q96JG8 741 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 CFAP53Q96M91 514 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 FAM218AQ96MZ4 157 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 CCM2Q9BSQ5 444 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 FTHL17Q9BXU8 183 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 VIPAS39Q9H9C1 493 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 GDF3Q9NR23 364 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 ERVK-18Q9QC07 812 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 MRPS2Q9Y399 296 aaKnown RBP3.2□□□□□ -1.9
CALD1-224ENST00000498254 SPATA31D1Q6ZQQ2 1576 aa3.2□□□□□ -1.9
CALD1-224ENST00000498254 A0A087WZY1 265 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 hCG_38984A0A1B0GV85 526 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 FAM172BPA6NC97 362 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 MSGN1A6NI15 193 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 YJEFN3A6XGL0 299 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 PMS2P5A8MQ11 134 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 A8MU76 341 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 TCP10L2B9ZVM9 353 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 SURF4O15260 269 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 KRT33AO76009 404 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 CLDN1O95832 211 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 EML2O95834 649 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 CA3P07451 260 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 UMODP07911 640 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 PRSS56P0CW18 603 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 HSPA5P11021 654 aaKnown RBP3.19□□□□□ -1.9
CALD1-224ENST00000498254 KRT13P13646 458 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 C4BPBP20851 252 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 GLRA1P23415 457 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 PPP2R1AP30153 589 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 IFNAR2P48551 515 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 DLX5P56178 289 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms