RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 RPF2Q9H7B2 306 aaKnown RBP18.23■□□□□ 0.51
HDAC4-212ENST00000495497 MS4A12Q9NXJ0 267 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 A0A1W2PQ72 361 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 K7EM74 188 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 PCDH17O14917 1159 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 PGRMC2O15173 223 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 FGF17O60258 216 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 SKAP2O75563 359 aaPredicted RBP18.22■□□□□ 0.51
HDAC4-212ENST00000495497 CHEK2O96017 543 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 GRK2P25098 689 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 BUD31P41223 144 aaPredicted RBP18.22■□□□□ 0.51
HDAC4-212ENST00000495497 MAPK12P53778 367 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 ACSM2AQ08AH3 577 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 KCNAB2Q13303 367 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 ACSM2BQ68CK6 577 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 PAPD4Q6PIY7 484 aaKnown RBP18.22■□□□□ 0.51
HDAC4-212ENST00000495497 MMP21Q8N119 569 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 FDCSPQ8NFU4 85 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 TM4SF18Q96CE8 201 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 THOC3Q96J01 351 aaKnown RBP18.22■□□□□ 0.51
HDAC4-212ENST00000495497 IMMP1LQ96LU5 166 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 ALOXE3Q9BYJ1 711 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 PNO1Q9NRX1 252 aaKnown RBP18.22■□□□□ 0.51
HDAC4-212ENST00000495497 GIMAP2Q9UG22 337 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 MCM8Q9UJA3 840 aa18.22■□□□□ 0.51
HDAC4-212ENST00000495497 POLR3HQ9Y535 204 aaPredicted RBP18.22■□□□□ 0.51
HDAC4-212ENST00000495497 SLC28A1O00337 649 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 PCDH7O60245 1069 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 RSL1D1O76021 490 aaKnown RBP18.21■□□□□ 0.51
HDAC4-212ENST00000495497 NR2F6P10588 404 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 NR1D1P20393 614 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 ITGA3P26006 1051 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 TLX1P31314 330 aaPredicted RBP18.21■□□□□ 0.51
HDAC4-212ENST00000495497 TIA1P31483 386 aaKnown RBP eCLIP18.21■□□□□ 0.51
HDAC4-212ENST00000495497 STX4Q12846 297 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 AIMP2Q13155 320 aaKnown RBP18.21■□□□□ 0.51
HDAC4-212ENST00000495497 SPIN4Q56A73 249 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 C11orf24Q96F05 449 aaPredicted RBP18.21■□□□□ 0.51
HDAC4-212ENST00000495497 ABHD17AQ96GS6 310 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 TUBB6Q9BUF5 446 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 NUDT9Q9BW91 350 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 SEMA4CQ9C0C4 833 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 ACBD3Q9H3P7 528 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 RIC8BQ9NVN3 520 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 PNPOQ9NVS9 261 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 RAP2CQ9Y3L5 183 aa18.21■□□□□ 0.51
HDAC4-212ENST00000495497 GNG14A0A1W2PPG7 69 aa18.2■□□□□ 0.5
HDAC4-212ENST00000495497 ATXN7O15265 892 aaPredicted RBP18.2■□□□□ 0.5
HDAC4-212ENST00000495497 RGS14O43566 566 aa18.2■□□□□ 0.5
HDAC4-212ENST00000495497 SEC22BO75396 215 aa18.2■□□□□ 0.5
HDAC4-212ENST00000495497 CEACAM4O75871 244 aa18.2■□□□□ 0.5
HDAC4-212ENST00000495497 JUNP05412 331 aaKnown RBP18.2■□□□□ 0.5
HDAC4-212ENST00000495497 PPP2R2AP63151 447 aa18.2■□□□□ 0.5
HDAC4-212ENST00000495497 FOLH1Q04609 750 aa18.2■□□□□ 0.5
HDAC4-212ENST00000495497 NR6A1Q15406 480 aa18.2■□□□□ 0.5
HDAC4-212ENST00000495497 NDUFAF5Q5TEU4 345 aa18.2■□□□□ 0.5
HDAC4-212ENST00000495497 TANKQ92844 425 aa18.2■□□□□ 0.5
HDAC4-212ENST00000495497 PPP1R36Q96LQ0 422 aa18.2■□□□□ 0.5
HDAC4-212ENST00000495497 C3orf30Q96M34 536 aa18.2■□□□□ 0.5
HDAC4-212ENST00000495497 ILKAPQ9H0C8 392 aaPredicted RBP18.2■□□□□ 0.5
HDAC4-212ENST00000495497 MANSC1Q9H8J5 431 aa18.2■□□□□ 0.5
HDAC4-212ENST00000495497 C5AR2Q9P296 337 aa18.2■□□□□ 0.5
HDAC4-212ENST00000495497 ATMQ13315 3056 aa18.2■□□□□ 0.5
HDAC4-212ENST00000495497 BSNQ9UPA5 3926 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 A0A1W2PS29 197 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 BLACEA4D250 179 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 MKRN2OSH3BPM6 223 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 SNNO75324 88 aaPredicted RBP18.19■□□□□ 0.5
HDAC4-212ENST00000495497 PDGFAP04085 211 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 IFNA16P05015 189 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 IL3P08700 152 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 ANXA4P09525 319 aaPredicted RBP18.19■□□□□ 0.5
HDAC4-212ENST00000495497 PRR35P0CG20 571 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 ITGAMP11215 1152 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 RPL14P50914 215 aaKnown RBP18.19■□□□□ 0.5
HDAC4-212ENST00000495497 TAS2R50P59544 299 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 KIAA0040Q15053 153 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 PDCD2Q16342 344 aaPredicted RBP18.19■□□□□ 0.5
HDAC4-212ENST00000495497 BTBD16Q32M84 506 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 GALNTL6Q49A17 601 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 RNF165Q6ZSG1 346 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 KBTBD2Q8IY47 623 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 DOK4Q8TEW6 326 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 C16orf78Q8WTQ4 265 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 PPWD1Q96BP3 646 aaKnown RBP18.19■□□□□ 0.5
HDAC4-212ENST00000495497 LPAR4Q99677 370 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 SLC25A23Q9BV35 468 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 WDR41Q9HAD4 459 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 LRTM1Q9HBL6 345 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 ZNF71Q9NQZ8 489 aaPredicted RBP18.19■□□□□ 0.5
HDAC4-212ENST00000495497 C1orf109Q9NX04 203 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 SIRT5Q9NXA8 310 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 GPR83Q9NYM4 423 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.19■□□□□ 0.5
HDAC4-212ENST00000495497 PCDHA9Q9Y5H5 950 aa18.19■□□□□ 0.5
HDAC4-212ENST00000495497 MED13Q9UHV7 2174 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 ATP6AP2A0A1C7CYW4 349 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 LSM1O15116 133 aaKnown RBP18.18■□□□□ 0.5
HDAC4-212ENST00000495497 ATP6AP2O75787 350 aa18.18■□□□□ 0.5
HDAC4-212ENST00000495497 MYO1DO94832 1006 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms