RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 WDR20Q8TBZ3 569 aa9.27□□□□□ -0.92
VPS8-225ENST00000492449 GLYATL2Q8WU03 294 aa9.27□□□□□ -0.92
VPS8-225ENST00000492449 WNT8BQ93098 351 aa9.27□□□□□ -0.92
VPS8-225ENST00000492449 SLC2A13Q96QE2 648 aa9.27□□□□□ -0.92
VPS8-225ENST00000492449 SPATA5L1Q9BVQ7 753 aa9.27□□□□□ -0.92
VPS8-225ENST00000492449 POLR2J2Q9GZM3 115 aaKnown RBP9.27□□□□□ -0.92
VPS8-225ENST00000492449 MINDY3Q9H8M7 445 aa9.27□□□□□ -0.92
VPS8-225ENST00000492449 DNAJC11Q9NVH1 559 aa9.27□□□□□ -0.92
VPS8-225ENST00000492449 MYEF2Q9P2K5 600 aaKnown RBP9.27□□□□□ -0.92
VPS8-225ENST00000492449 COMMD3Q9UBI1 195 aa9.27□□□□□ -0.92
VPS8-225ENST00000492449 SEC14L3Q9UDX4 400 aa9.27□□□□□ -0.92
VPS8-225ENST00000492449 FTSJ1Q9UET6 329 aa9.27□□□□□ -0.92
VPS8-225ENST00000492449 NDOR1Q9UHB4 597 aa9.27□□□□□ -0.92
VPS8-225ENST00000492449 BTNL2Q9UIR0 455 aa9.27□□□□□ -0.92
VPS8-225ENST00000492449 CCNL1Q9UK58 526 aaPredicted RBP9.27□□□□□ -0.92
VPS8-225ENST00000492449 SF3B6Q9Y3B4 125 aaKnown RBP9.27□□□□□ -0.92
VPS8-225ENST00000492449 RALGAPA2Q2PPJ7 1873 aa9.27□□□□□ -0.92
VPS8-225ENST00000492449 PAGE1O75459 146 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 HPP00738 406 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 FBP1P09467 338 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 DRD2P14416 443 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 CXCL2P19875 107 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 TAF1AQ15573 450 aaPredicted RBP9.27□□□□□ -0.93
VPS8-225ENST00000492449 CHRNA6Q15825 494 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 CRY2Q49AN0 593 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 FUT10Q6P4F1 479 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 CD200R1LQ6Q8B3 271 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 IL27RAQ6UWB1 636 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 ALKAL1Q6UXT8 129 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 MSANTD1Q6ZTZ1 278 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 ACOT1Q86TX2 421 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 ZBTB8OSQ8IWT0 167 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 PDZD9Q8IXQ8 264 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 TMEM130Q8N3G9 435 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 OR2T35Q8NGX2 323 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 CPEB1Q9BZB8 566 aaKnown RBP9.27□□□□□ -0.93
VPS8-225ENST00000492449 ZNF768Q9H5H4 540 aaKnown RBP9.27□□□□□ -0.93
VPS8-225ENST00000492449 SEBOXQ9HB31 216 aaPredicted RBP9.27□□□□□ -0.93
VPS8-225ENST00000492449 NUDT15Q9NV35 164 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 SPHK1Q9NYA1 384 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 GALPQ9UBC7 116 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 CLEC2DQ9UHP7 191 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 SLC22A7Q9Y694 548 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 NYNRINQ9P2P1 1898 aaKnown RBP9.27□□□□□ -0.93
VPS8-225ENST00000492449 PLXNA1Q9UIW2 1896 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 TNFRSF11BO00300 401 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 SULT1C2O00338 296 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 OR1I1O60431 355 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 TCRBP04435 133 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 ENGP17813 658 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 AHCYP23526 432 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 SPAM1P38567 509 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 VEGFCP49767 419 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 HTR6P50406 440 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 OSTNP61366 133 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 PITX1P78337 314 aaPredicted RBP9.27□□□□□ -0.93
VPS8-225ENST00000492449 LGALS3BPQ08380 585 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 STX4Q12846 297 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 VEZF1Q14119 521 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 PTGR1Q14914 329 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 PTPRRQ15256 657 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 HECTD3Q5T447 861 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 LIPKQ5VXJ0 399 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 VASNQ6EMK4 673 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 MSANTD2Q6P1R3 559 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 ADGRG2Q8IZP9 1017 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 C12orf45Q8N5I9 185 aaPredicted RBP9.27□□□□□ -0.93
VPS8-225ENST00000492449 ZDHHC1Q8WTX9 485 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 EDARADDQ8WWZ3 215 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 TM9SF4Q92544 642 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 RFT1Q96AA3 541 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 SENP5Q96HI0 755 aaPredicted RBP9.27□□□□□ -0.93
VPS8-225ENST00000492449 OSMRQ99650 979 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 AARSD1Q9BTE6 412 aaKnown RBP9.27□□□□□ -0.93
VPS8-225ENST00000492449 PDCD10Q9BUL8 212 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 FSD1LQ9BXM9 530 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 CDCP1Q9H5V8 836 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 AGO3Q9H9G7 860 aaKnown RBP9.27□□□□□ -0.93
VPS8-225ENST00000492449 ZNF302Q9NR11 478 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 PIGVQ9NUD9 493 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 HACL1Q9UJ83 578 aa9.27□□□□□ -0.93
VPS8-225ENST00000492449 IGKV6D-21A0A0A0MT36 114 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 A0A0G2JPF8 293 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 RAB19A4D1S5 217 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 DBX1A6NMT0 343 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 HNRNPCL3B7ZW38 293 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 SDC3O75056 442 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 VTNP04004 478 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 HNRNPCL4P0DMR1 293 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 POU2F1P14859 743 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 RAB3BP20337 219 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 ACSL1P33121 698 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 ATP5C1P36542 298 aaKnown RBP9.26□□□□□ -0.93
VPS8-225ENST00000492449 PIK3CGP48736 1102 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 AGTR2P50052 363 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 TSPAN5P62079 268 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 ACVR1Q04771 509 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 NTRK2Q16620 822 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 ST3GAL2Q16842 350 aa9.26□□□□□ -0.93
VPS8-225ENST00000492449 OVOS1Q6IE37 1185 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms