RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 PCDHA12Q9UN75 941 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 LIPT1Q9Y234 373 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 TP53TG5Q9Y2B4 290 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 AMDHD2Q9Y303 409 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 YIPF1Q9Y548 306 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 INSL5Q9Y5Q6 135 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 SLCO1B1Q9Y6L6 691 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 DYSFO75923 2080 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 POLEQ07864 2286 aa2.19□□□□□ -2.06
CALD1-216ENST00000473714 PTPRCP08575 1304 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 TRIP11Q15643 1979 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 FER1L5A0AVI2 2057 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 MDC1Q14676 2089 aaKnown RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 HERC2O95714 4834 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 RNF103-CHMP3A0A140T963 221 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 MAGEA13PA6NCF6 341 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 SDR42E2A6NKP2 422 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 BECN2A8MW95 431 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 MEI4A8MW99 385 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 ANKRD66B4E2M5 251 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 FAM90A26D6RGX4 464 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 H3BNX3 289 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 CCDC188H7C350 402 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 I6L893 689 aaPredicted RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 J3KR12 359 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 K7EM74 188 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 RNF103O00237 685 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 LAD1O00515 517 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 WNT9BO14905 357 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 TO15178 435 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 CTDSPLO15194 276 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 YKT6O15498 198 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 ST8SIA3O43173 380 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 GPR137BO60478 399 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 KCNJ13O60928 360 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 ATP6V1G1O75348 118 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 CSDE1O75534 798 aaKnown RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 PRDM1O75626 825 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 CREG1O75629 220 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 BCAR3O75815 825 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 TNFSF15O95150 251 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 KLF8O95600 359 aaPredicted RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 LY6G6DO95868 133 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 H1F0P07305 194 aaKnown RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 TMEM191BP0C7N4 346 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 C8orf89P0DMQ9 161 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 UROSP10746 265 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 HSPD1P10809 573 aaKnown RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 GABRG2P18507 467 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 ADRA2CP18825 462 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 EPORP19235 508 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 JAK1P23458 1154 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 CHMLP26374 656 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 HOXD3P31249 432 aaPredicted RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 HPDP32754 393 aaPredicted RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 OR1D2P34982 312 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 MNDAP41218 407 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 APOBEC1P41238 236 aaKnown RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 MXI1P50539 228 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 ZNF131P52739 623 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 MTCP1P56278 107 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 CLDN20P56880 219 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 POLR2FP61218 127 aaKnown RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 POLR2LP62875 67 aaKnown RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 DEFA6Q01524 100 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 SPOCK1Q08629 439 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 C17orf67Q0P5P2 114 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 TRAF2Q12933 501 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 CUL3Q13618 768 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 KLF9Q13886 244 aaPredicted RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 VEZF1Q14119 521 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 RABEP1Q15276 862 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 CALCRLQ16602 461 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 UGP2Q16851 508 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 ISXQ2M1V0 245 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 ZNF630Q2M218 657 aaPredicted RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 MCMDC2Q4G0Z9 681 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 IQCCQ4KMZ1 466 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 SETMARQ53H47 684 aaPredicted RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 KLHL26Q53HC5 615 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 KRTCAP3Q53RY4 240 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 DNAJC21Q5F1R6 531 aaKnown RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 XKR9Q5GH70 373 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 PAPPA-AS1Q5QFB9 102 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 C10orf25Q5T742 122 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 NDUFAF5Q5TEU4 345 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 KIAA1161Q6NSJ0 714 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 FAM122CQ6P4D5 195 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 BRAT1Q6PJG6 821 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 FAM198BQ6UWH4 519 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 TMEM182Q6ZP80 229 aaPredicted RBP2.18□□□□□ -2.06
CALD1-216ENST00000473714 PLEKHM3Q6ZWE6 761 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 CATSPER4Q7RTX7 472 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 MIER3Q7Z3K6 550 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 IRF2BP2Q7Z5L9 587 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 NRARPQ7Z6K4 114 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 PIGWQ7Z7B1 504 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 ALLCQ8N6M5 410 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 CCDC63Q8NA47 563 aa2.18□□□□□ -2.06
CALD1-216ENST00000473714 SLC38A9Q8NBW4 561 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms