RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SLC38A3Q99624 504 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 DUSP26Q9BV47 211 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ACTR6Q9GZN1 396 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 METTL9Q9H1A3 318 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 IMP3Q9NV31 184 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ASB1Q9Y576 335 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 KLK4Q9Y5K2 254 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ORC6Q9Y5N6 252 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM234BA2RU67 622 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 G3V2T6 193 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 UPK1AO00322 258 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 BCKDKO14874 412 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 TGFB1I1O43294 461 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 GADD45GO95257 159 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 IFNA10P01566 189 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 GCP02774 474 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 RNASE1P07998 156 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 STSP08842 583 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 HOXC4P09017 264 aaPredicted RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 SSTR4P31391 388 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 CDKN2BP42772 138 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 MAGEA6P43360 314 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC12A3P55017 1021 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 CDH6P55285 790 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 MAZP56270 477 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 SRSF2Q01130 221 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ROR1Q01973 937 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 TP53BP2Q13625 1128 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 DOC2AQ14183 400 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 GRM4Q14833 912 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 MPEG1Q2M385 716 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ATP13A5Q4VNC0 1218 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ATRAIDQ6UW56 229 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 TMEM107Q6UX40 140 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 B3GNT8Q7Z7M8 397 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC47A2Q86VL8 602 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 CILP2Q8IUL8 1156 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 SKA3Q8IX90 412 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 RIMKLAQ8IXN7 391 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM217AQ8IXS0 508 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 PRR18Q8N4B5 295 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 NANOGP1Q8N7R0 232 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 C7orf31Q8N865 590 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 CREB3L1Q96BA8 519 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ERMAPQ96PL5 475 aaPredicted RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC38A2Q96QD8 506 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 PPP1R16BQ96T49 567 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 WDR77Q9BQA1 342 aaPredicted RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 APOL2Q9BQE5 337 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 GATA5Q9BWX5 397 aaPredicted RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 SORBS1Q9BX66 1292 aaKnown RBP4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 SEMA4CQ9C0C4 833 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 VAT1LQ9HCJ6 419 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ZDHHC4Q9NPG8 344 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 DMAC2Q9NW81 257 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 HCN3Q9P1Z3 774 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 ADAM28Q9UKQ2 775 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 CDH9Q9ULB4 789 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 STUB1Q9UNE7 303 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 PCDHB7Q9Y5E2 793 aa4.91□□□□□ -1.62
TMEM39A-206ENST00000473684 UBA6A0AVT1 1052 aaPredicted RBP4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 ARHGEF33A8MVX0 844 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 G3V2L1 256 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 PPP6CO00743 305 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 SDHDO14521 159 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 CLIC2O15247 247 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 CHP2O43745 196 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 IL33O95760 270 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 PEX11BO96011 259 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 C9P02748 559 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 UNGP13051 313 aaPredicted RBP4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 ANXA8P13928 327 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 NDUFB7P17568 137 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 UBA1P22314 1058 aaKnown RBP4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 LHCGRP22888 699 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 AOAHP28039 575 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 CALCRP30988 508 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 GCLMP48507 274 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 SULT1E1P49888 294 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 NAPAP54920 295 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 RAB5BP61020 215 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 IL5RAQ01344 420 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 DSC2Q02487 901 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 ECH1Q13011 328 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 SMCO1Q147U7 214 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 GLYR1Q49A26 553 aaPredicted RBP4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 CT83Q5H943 113 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 COQ5Q5HYK3 327 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 ANXA8L1Q5VT79 327 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 LIPMQ5VYY2 423 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 HAGHLQ6PII5 290 aaPredicted RBP4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 ANKRD46Q86W74 232 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 CDKL3Q8IVW4 592 aaPredicted RBP4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 THEM5Q8N1Q8 247 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 UXS1Q8NBZ7 420 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 ACTL9Q8TC94 416 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 GJA10Q969M2 543 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 CRB3Q9BUF7 120 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 HTATIP2Q9BUP3 242 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 MED28Q9H204 178 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms