RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 ATAT1Q5SQI0 421 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 DDI2Q5TDH0 399 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 CHMP1BQ7LBR1 199 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 GHDCQ8N2G8 530 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 SYNPOQ8N3V7 929 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 CPA6Q8N4T0 437 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 ZNF366Q8N895 744 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 OR11H7Q8NGC8 314 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 OR4K1Q8NGD4 311 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.6□□□□□ -1.192e-8■■■■□ 26.5
TPM3-215ENST00000469717 TM9SF4Q92544 642 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 DACT3Q96B18 629 aaPredicted RBP7.6□□□□□ -1.19
TPM3-215ENST00000469717 NELL2Q99435 816 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 PKP4Q99569 1192 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 DOHHQ9BU89 302 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 SERHL2Q9H4I8 314 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 ZFP64Q9NPA5 681 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 GPATCH2Q9NW75 528 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 ELF5Q9UKW6 265 aaPredicted RBP7.6□□□□□ -1.19
TPM3-215ENST00000469717 SSR3Q9UNL2 185 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 POFUT2Q9Y2G5 429 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 AP3M1Q9Y2T2 418 aa7.6□□□□□ -1.19
TPM3-215ENST00000469717 IQCMA0A1B0GVH7 501 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 INMT-MINDY4F8WBC2 141 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 PRAMEF11O60813 436 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 PCSK1P29120 753 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 SOX18P35713 384 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 PRIM2P49643 509 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 CDC42P60953 191 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 TLE2Q04725 743 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 EXOSC2Q13868 293 aaKnown RBP7.59□□□□□ -1.19
TPM3-215ENST00000469717 GALEQ14376 348 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 TAF1AQ15573 450 aaPredicted RBP7.59□□□□□ -1.19
TPM3-215ENST00000469717 AANATQ16613 207 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 HKDC1Q2TB90 917 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 NOXRED1Q6NXP6 359 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 BRAT1Q6PJG6 821 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 IL20RBQ6UXL0 311 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 THEM5Q8N1Q8 247 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 FAM181AQ8N9Y4 354 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 SKA2Q8WVK7 121 aaPredicted RBP7.59□□□□□ -1.19
TPM3-215ENST00000469717 AKAP1Q92667 903 aaKnown RBP eCLIP7.59□□□□□ -1.198e-7■■■■□ 24.6
TPM3-215ENST00000469717 WDR90Q96KV7 1748 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 KCTD5Q9NXV2 234 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 MBD1Q9UIS9 605 aaPredicted RBP7.59□□□□□ -1.19
TPM3-215ENST00000469717 EXO1Q9UQ84 846 aaKnown RBP7.59□□□□□ -1.19
TPM3-215ENST00000469717 SLC45A1Q9Y2W3 748 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 KCNE2Q9Y6J6 123 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 LOC105369274A0A096LPK9 316 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 TRBV4-1A0A0J9YWV2 114 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 RPS10-NUDT3A0A1W2PQS6 291 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 FADS2P1A8MWK0 482 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 ETV5P41161 510 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 ETV1P50549 477 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 CLCN4P51793 760 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 RPS24P62847 133 aaKnown RBP7.59□□□□□ -1.19
TPM3-215ENST00000469717 BCL2L1Q07817 233 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 TWF1Q12792 350 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 TYW3Q6IPR3 259 aaKnown RBP7.59□□□□□ -1.19
TPM3-215ENST00000469717 ALKBH2Q6NS38 261 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 UNC5DQ6UXZ4 953 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 CFAP77Q6ZQR2 320 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 USP30Q70CQ3 517 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 OR4N4Q8N0Y3 316 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 TCEANCQ8N8B7 351 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 SMAD5Q99717 465 aaKnown RBP7.59□□□□□ -1.19
TPM3-215ENST00000469717 ATG10Q9H0Y0 220 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 P2RY12Q9H244 342 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 NMNAT1Q9HAN9 279 aaPredicted RBP7.59□□□□□ -1.19
TPM3-215ENST00000469717 ACER3Q9NUN7 267 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 CLN6Q9NWW5 311 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 FTSJ1Q9UET6 329 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 F5P12259 2224 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 GSAPA4D1B5 854 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 ARL5CA6NH57 179 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 GABRR3A8MPY1 467 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 WASH4PA8MWX3 477 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 CHP2O43745 196 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 ACSL4O60488 711 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 DUSP11O75319 330 aaKnown RBP7.59□□□□□ -1.19
TPM3-215ENST00000469717 CLDN9O95484 217 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 PTPN5P54829 565 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 CLDN20P56880 219 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 BNC1Q01954 994 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 ZNF91Q05481 1191 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 CRTC2Q53ET0 693 aaPredicted RBP7.59□□□□□ -1.19
TPM3-215ENST00000469717 TMEM81Q6P7N7 255 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 CEACAM20Q6UY09 585 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 GPR155Q7Z3F1 870 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 TMCO2Q7Z6W1 182 aaPredicted RBP7.59□□□□□ -1.19
TPM3-215ENST00000469717 GDPD1Q8N9F7 314 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 DBF4BQ8NFT6 615 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 NFKBIDQ8NI38 313 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 GATAD2BQ8WXI9 593 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 TESCQ96BS2 214 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 MSLNLQ96KJ4 702 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 FERD3LQ96RJ6 166 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 FAM126AQ9BYI3 521 aaPredicted RBP7.59□□□□□ -1.19
TPM3-215ENST00000469717 MCOLN1Q9GZU1 580 aa7.59□□□□□ -1.19
TPM3-215ENST00000469717 NDUFB11Q9NX14 153 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms