RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ARMCX2Q7L311 632 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 MILR1Q7Z6M3 343 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 ABI3BPQ7Z7G0 1075 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 ZER1Q7Z7L7 766 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 PTOV1Q86YD1 416 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 SYNPOQ8N3V7 929 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 CHFRQ96EP1 664 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 TPD52L3Q96J77 140 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 CDK15Q96Q40 435 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 NIPSNAP1Q9BPW8 284 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 YIPF4Q9BSR8 244 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 INPP5KQ9BT40 448 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 C1QTNF6Q9BXI9 259 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 NKX6-2Q9C056 277 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 RNF32Q9H0A6 362 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 ABCG5Q9H222 651 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 THSD1Q9NS62 852 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 MALT1Q9UDY8 824 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 USP21Q9UK80 565 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 EDARQ9UNE0 448 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 EXO1Q9UQ84 846 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 DENND4AQ7Z401 1863 aa8.63□□□□□ -1.03
SMARCE1-207ENST00000469334 SCN8AQ9UQD0 1980 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 TRDV1A0A1B0GX56 115 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 IRGMA1A4Y4 181 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 ANKDD1BA6NHY2 528 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 L7N2F9 121 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 CLIC1O00299 241 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 CASKO14936 926 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 SMAD6O43541 496 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 SOX30O94993 753 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 APOC3P02656 99 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 TCRBP04435 133 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 ACPPP15309 386 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 BPIP17213 487 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 PPIBP23284 216 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 RBMS1P29558 406 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 PCGF2P35227 344 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 PRMT2P55345 433 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 VSX2P58304 361 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 SPIBQ01892 262 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 LRRC32Q14392 662 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 DUOXA1Q1HG43 343 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 MICBQ29980 383 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 CCDC157Q569K6 752 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 FRMPD2BQ6IN97 320 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 CD200R1LQ6Q8B3 271 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 SUSD1Q6UWL2 747 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 PGAP1Q75T13 922 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 NLRC3Q7RTR2 1065 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 PRICKLE2Q7Z3G6 844 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 TMPRSS9Q7Z410 1059 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 PDZD9Q8IXQ8 264 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 OR2T35Q8NGX2 323 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 OR4L1Q8NH43 312 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 OR52N1Q8NH53 320 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 TM9SF4Q92544 642 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 NDRG1Q92597 394 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 USP7Q93009 1102 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 TCEAL3Q969E4 200 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 MRPS24Q96EL2 167 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 LRRC46Q96FV0 321 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 HHIPQ96QV1 700 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 BBS4Q96RK4 519 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 TREX2Q9BQ50 279 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 MINDY3Q9H8M7 445 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 REV1Q9UBZ9 1251 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 PRKAG2Q9UGJ0 569 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 TRPS1Q9UHF7 1281 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 CLEC2DQ9UHP7 191 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 NEU3Q9UQ49 428 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 TRABD2BA6NFA1 517 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 G3V3Q6 166 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 TLR4O00206 839 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 PRAF2O60831 178 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 ENTPD6O75354 484 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 RAB36O95755 333 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 CBX7O95931 251 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 EPOP01588 193 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 HRGP04196 525 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 HIST1H2AGP0C0S8 130 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 BCKDHAP12694 445 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 JUPP14923 745 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 SYN1P17600 705 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 HIST1H2ADP20671 130 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 UBA1P22314 1058 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 AHCYP23526 432 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 CCR1P32246 355 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 ACSL1P33121 698 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 CNR2P34972 360 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 HNF1BP35680 557 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 HSD17B2P37059 387 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 CDKN2CP42773 168 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 PIK3CGP48736 1102 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 HNMTP50135 292 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 DAOAP59103 153 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 IL2P60568 153 aa8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 RPS7P62081 194 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 CCDC85BQ15834 202 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-207ENST00000469334 OCLNQ16625 522 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms