RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 MAPKAP1Q9BPZ7 522 aa10.92□□□□□ -0.66
LINC00408-201ENST00000447784 ZNF717Q9BY31 904 aaPredicted RBP10.92□□□□□ -0.66
LINC00408-201ENST00000447784 TGIF2Q9GZN2 237 aa10.92□□□□□ -0.66
LINC00408-201ENST00000447784 SOX17Q9H6I2 414 aaPredicted RBP10.92□□□□□ -0.66
LINC00408-201ENST00000447784 NOP53Q9NZM5 478 aaKnown RBP10.92□□□□□ -0.66
LINC00408-201ENST00000447784 IL17BQ9UHF5 180 aa10.92□□□□□ -0.66
LINC00408-201ENST00000447784 DCTN4Q9UJW0 460 aa10.92□□□□□ -0.66
LINC00408-201ENST00000447784 C3orf18Q9UK00 162 aa10.92□□□□□ -0.66
LINC00408-201ENST00000447784 TCFL5Q9UL49 500 aa10.92□□□□□ -0.66
LINC00408-201ENST00000447784 ZFYVE26Q68DK2 2539 aa10.92□□□□□ -0.66
LINC00408-201ENST00000447784 IGLV3-12A0A075B6K2 115 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 A0A0G2JND7 137 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 VSTM2BA6NLU5 285 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 FAM227AF5H4B4 570 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 SDHDO14521 159 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 NKX2-8O15522 239 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 PROM1O43490 865 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 PRMT3O60678 531 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 PRPS2P11908 318 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 DRD2P14416 443 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 ACPPP15309 386 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 ALOX15P16050 662 aaPredicted RBP10.91□□□□□ -0.66
LINC00408-201ENST00000447784 PCSK2P16519 638 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 F8A1P23610 371 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 ASMTP46597 345 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 ALDH9A1P49189 494 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 IDH3AP50213 366 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 HSD17B7P56937 341 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 RAE1P78406 368 aaKnown RBP10.91□□□□□ -0.66
LINC00408-201ENST00000447784 TNFRSF17Q02223 184 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 KLC1Q07866 573 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 ACTN3Q08043 901 aaPredicted RBP10.91□□□□□ -0.66
LINC00408-201ENST00000447784 C19orf57Q0VDD7 668 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 CDC20Q12834 499 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 STX4Q12846 297 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 ERV3-1Q14264 604 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 KIAA0040Q15053 153 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 NDUFAF5Q5TEU4 345 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 BORAQ6PGQ7 559 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 IKBIPQ70UQ0 350 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 MTERF4Q7Z6M4 381 aaKnown RBP10.91□□□□□ -0.66
LINC00408-201ENST00000447784 OR2Y1Q8NGV0 311 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 C16orf78Q8WTQ4 265 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 TANKQ92844 425 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 EXTL1Q92935 676 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 ARHGAP9Q9BRR9 750 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 C1orf50Q9BV19 199 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 FAM107BQ9H098 131 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 ACTL8Q9H568 366 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 RPF2Q9H7B2 306 aaKnown RBP10.91□□□□□ -0.66
LINC00408-201ENST00000447784 TCF7L2Q9NQB0 619 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 MIEF1Q9NQG6 463 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 PRDM9Q9NQV7 894 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 PRTFDC1Q9NRG1 225 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 SEMA3GQ9NS98 782 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 KCMF1Q9P0J7 381 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 GIMAP2Q9UG22 337 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 DLGAP4Q9Y2H0 992 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 ATG4BQ9Y4P1 393 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 ASB4Q9Y574 426 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 AHCTF1Q8WYP5 2266 aa10.91□□□□□ -0.66
LINC00408-201ENST00000447784 SDK2Q58EX2 2172 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 A0A1W2PR48 441 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 C1orf226A1L170 272 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 SYNDIG1LA6NDD5 238 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 IDSB3KWA1 339 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 CYR61O00622 381 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 PEX12O00623 359 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 PCDH17O14917 1159 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 CTNSO60931 367 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 JRKO75564 520 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 CREG1O75629 220 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 C1QL1O75973 258 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 AIFM1O95831 613 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 CYC1P08574 325 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 IL3P08700 152 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 BCKDHAP12694 445 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 OTX2P32243 289 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 HPCAL1P37235 193 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 RPL3P39023 403 aaKnown RBP10.9□□□□□ -0.66
LINC00408-201ENST00000447784 ARFIP2P53365 341 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 HNRNPH2P55795 449 aaKnown RBP10.9□□□□□ -0.66
LINC00408-201ENST00000447784 C2orf80Q0P641 193 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 LY6DQ14210 128 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 NSDHLQ15738 373 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 SLC9B1Q4ZJI4 515 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 C18orf63Q68DL7 685 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 OR52E8Q6IFG1 317 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 MRM1Q6IN84 353 aaKnown RBP10.9□□□□□ -0.66
LINC00408-201ENST00000447784 LARP4Q71RC2 724 aaKnown RBP eCLIP10.9□□□□□ -0.66
LINC00408-201ENST00000447784 MAVSQ7Z434 540 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 RAB43Q86YS6 212 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 ZNF843Q8N446 348 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 LIX1Q8N485 282 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 EXD3Q8N9H8 876 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 TM4SF18Q96CE8 201 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 C11orf24Q96F05 449 aaPredicted RBP10.9□□□□□ -0.66
LINC00408-201ENST00000447784 PTCHD1Q96NR3 888 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 TSSK3Q96PN8 268 aa10.9□□□□□ -0.66
LINC00408-201ENST00000447784 ZNF317Q96PQ6 595 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms