RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 AP2B1P63010 937 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 PPP2R2AP63151 447 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 RAE1P78406 368 aaKnown RBP16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 BST1Q10588 318 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 SLC13A2Q13183 592 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 SERTAD2Q14140 314 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 KIAA0040Q15053 153 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 TERF2Q15554 542 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 CPZQ66K79 652 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 ATG16L1Q676U5 607 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 FAAH2Q6GMR7 532 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 RIPOR1Q6ZS17 1223 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 EFCAB3Q8N7B9 438 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 MGARPQ8TDB4 240 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 TWIST2Q8WVJ9 160 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 TM4SF18Q96CE8 201 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 ARHGAP9Q9BRR9 750 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 TRIM55Q9BYV6 548 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 MANSC1Q9H8J5 431 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 WDR41Q9HAD4 459 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 PFDN4Q9NQP4 134 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 VTI1BQ9UEU0 232 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 PCDHGB7Q9Y5F8 929 aa16.44■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 ATXN7O15265 892 aaPredicted RBP16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 SNNO75324 88 aaPredicted RBP16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 LYPLA1O75608 230 aaPredicted RBP16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 GBAP04062 536 aa16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 TIA1P31483 386 aaKnown RBP eCLIP16.43■□□□□ 0.221e-7■■□□□ 14
COMMD3-BMI1-201ENST00000417470 RPL14P50914 215 aaKnown RBP16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 OR4D2P58180 307 aa16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 EEF1A2Q05639 463 aaKnown RBP16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 SFT2D3Q587I9 215 aa16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 XKR7Q5GH72 579 aa16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 C18orf63Q68DL7 685 aa16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 PLAG1Q6DJT9 500 aa16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 GALNT16Q8N428 558 aa16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 ANKRD9Q96BM1 317 aaPredicted RBP16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 FCRL1Q96LA6 429 aa16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 LPAR4Q99677 370 aa16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 C1orf109Q9NX04 203 aa16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 PPIEQ9UNP9 301 aaKnown RBP16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 TMED5Q9Y3A6 229 aa16.43■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 C1orf226A1L170 272 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 TMEM233B4DJY2 109 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 MKRN2OSH3BPM6 223 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 TGFBR3LH3BV60 316 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 PCDH7O60245 1069 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 AIFM1O95831 613 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 SERPINA7P05543 415 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 NR2F6P10588 404 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 CCL11P51671 97 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 ACTN3Q08043 901 aaPredicted RBP16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 Q0VFX4 171 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 KCNAB2Q13303 367 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 MYBPC3Q14896 1274 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 EXT1Q16394 746 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 SPDYAQ5MJ70 313 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 NDUFAF5Q5TEU4 345 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 TCTN3Q6NUS6 607 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 JMJD6Q6NYC1 403 aaPredicted RBP16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 KBTBD2Q8IY47 623 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 ZNF781Q8N8C0 355 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 EXD3Q8N9H8 876 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 DNAJB14Q8TBM8 379 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 M1APQ8TC57 530 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 ALOXE3Q9BYJ1 711 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 ZNF395Q9H8N7 513 aaPredicted RBP16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 ZNF160Q9HCG1 818 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 TEX10Q9NXF1 929 aaPredicted RBP16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 PCDHA9Q9Y5H5 950 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 MED13Q9UHV7 2174 aa16.42■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 IGSF10Q6WRI0 2623 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 SAGE2PA6NJ88 616 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 PIP5K1BO14986 540 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 LSM1O15116 133 aaKnown RBP16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 DNAJB5O75953 348 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 MYO1DO94832 1006 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 GPR75O95800 540 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 LINC00032P0C843 101 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 DRD2P14416 443 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 GALNSP34059 522 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 BTKQ06187 659 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 STX4Q12846 297 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 CHAF1BQ13112 559 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 ELAVL1Q15717 326 aaKnown RBP16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 OR52E8Q6IFG1 317 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 PAPD4Q6PIY7 484 aaKnown RBP16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 OR2T11Q8NH01 316 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.41■□□□□ 0.226e-6■■■□□ 15.1
COMMD3-BMI1-201ENST00000417470 ZNF75CPQ92670 426 aaPredicted RBP16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 ABHD17AQ96GS6 310 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 PPP3R2Q96LZ3 170 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 SMAD5Q99717 465 aaKnown RBP16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 FAIM2Q9BWQ8 316 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 LHPPQ9H008 270 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 LRTM1Q9HBL6 345 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 MMP25Q9NPA2 562 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 ADAP2Q9NPF8 381 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 CES1P1Q9UKY3 287 aa16.41■□□□□ 0.22
COMMD3-BMI1-201ENST00000417470 G3BP2Q9UN86 482 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms