RNA–Protein interactions for RNA: ENST00000409798.5

NUP35-203, Transcript of nucleoporin 35, humanhuman

TSL 2 BASIC

Gene NUP35, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-203ENST00000409798 ZC3H3Q8IXZ2 948 aaKnown RBP3.56□□□□□ -1.84
NUP35-203ENST00000409798 FAM9CQ8IZT9 166 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 RNF148Q8N7C7 305 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 C9orf106Q8NAJ2 232 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 TRIM58Q8NG06 486 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 OR13A1Q8NGR1 328 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 OR8K3Q8NH51 312 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 FAM76AQ8TAV0 307 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 GOLGA5Q8TBA6 731 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 GANCQ8TET4 914 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 U2AF1L4Q8WU68 220 aaKnown RBP3.56□□□□□ -1.84
NUP35-203ENST00000409798 RAB7BQ96AH8 199 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 NXPE2Q96DL1 559 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 MED30Q96HR3 178 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 ATP6V1G3Q96LB4 118 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 CATSPER2Q96P56 530 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 DUX5Q96PT3 197 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 UQCC2Q9BRT2 126 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 WACQ9BTA9 647 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 NFKBIZQ9BYH8 718 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 CCSER1Q9C0I3 900 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 BICC1Q9H694 974 aaKnown RBP3.56□□□□□ -1.84
NUP35-203ENST00000409798 C8orf33Q9H7E9 229 aaPredicted RBP3.56□□□□□ -1.84
NUP35-203ENST00000409798 ECT2Q9H8V3 914 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 RPRD1BQ9NQG5 326 aaKnown RBP3.56□□□□□ -1.84
NUP35-203ENST00000409798 GDAP2Q9NXN4 497 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 CNOT2Q9NZN8 540 aaKnown RBP3.56□□□□□ -1.84
NUP35-203ENST00000409798 FBXL4Q9UKA2 621 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 SATB2Q9UPW6 733 aa3.56□□□□□ -1.84
NUP35-203ENST00000409798 MRPS2Q9Y399 296 aaKnown RBP3.56□□□□□ -1.84
NUP35-203ENST00000409798 TRIP12Q14669 1992 aaPredicted RBP3.55□□□□□ -1.84
NUP35-203ENST00000409798 MTMR11A4FU01 709 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 EME2A4GXA9 379 aaPredicted RBP3.55□□□□□ -1.84
NUP35-203ENST00000409798 SNURFLB1AK76 121 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 CLDN3O15551 220 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 SMAD6O43541 496 aaKnown RBP3.55□□□□□ -1.84
NUP35-203ENST00000409798 RANBP6O60518 1105 aaKnown RBP3.55□□□□□ -1.84
NUP35-203ENST00000409798 LRP3O75074 770 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 KRT33AO76009 404 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 PPP1R3DO95685 299 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 TSHBP01222 138 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 SERPINF2P08697 491 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 FRMD6-AS1P0C7T7 363 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 TNFRSF4P43489 277 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 LBX1P52954 281 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 GEMP55040 296 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 HERV-K104P63124 156 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 GABPAQ06546 454 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 GPR50Q13585 617 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 EFTUD2Q15029 972 aaKnown RBP eCLIP3.55□□□□□ -1.845e-6■■■■□ 23.8
NUP35-203ENST00000409798 EXT1Q16394 746 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 TECRLQ5HYJ1 363 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 RIPPLY2Q5TAB7 128 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 C9orf57Q5W0N0 161 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 SNRNP48Q6IEG0 339 aaKnown RBP3.55□□□□□ -1.84
NUP35-203ENST00000409798 ARSKQ6UWY0 536 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 CYP4V2Q6ZWL3 525 aaPredicted RBP3.55□□□□□ -1.84
NUP35-203ENST00000409798 FCRLAQ7L513 359 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 TRMT11Q7Z4G4 463 aaKnown RBP3.55□□□□□ -1.84
NUP35-203ENST00000409798 NFE4Q86UQ8 179 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 AMZ2Q86W34 360 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 WDR49Q8IV35 697 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 KIRREL3Q8IZU9 778 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 GPC2Q8N158 579 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 NAGSQ8N159 534 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 ZNF843Q8N446 348 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 FAM89BQ8N5H3 189 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 KBTBD3Q8NAB2 608 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 DMBX1Q8NFW5 382 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 OR13C5Q8NGS8 318 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 LILRB4Q8NHJ6 448 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 DQX1Q8TE96 717 aaKnown RBP3.55□□□□□ -1.84
NUP35-203ENST00000409798 SELENOMQ8WWX9 145 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 FCGR1BQ92637 280 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 BPIFA2Q96DR5 249 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 ARL5BQ96KC2 179 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 ZNF354BQ96LW1 612 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 GPR137Q96N19 417 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 TTC25Q96NG3 672 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 LPAR4Q99677 370 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 ERP44Q9BS26 406 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 NUSAP1Q9BXS6 441 aaKnown RBP3.55□□□□□ -1.84
NUP35-203ENST00000409798 GANQ9H2C0 597 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 VCX3BQ9H321 246 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 XKR8Q9H6D3 395 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 EGLN3Q9H6Z9 239 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 DDX31Q9H8H2 851 aaKnown RBP3.55□□□□□ -1.84
NUP35-203ENST00000409798 GORASP2Q9H8Y8 452 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 TMEM165Q9HC07 324 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 DDX28Q9NUL7 540 aaKnown RBP3.55□□□□□ -1.84
NUP35-203ENST00000409798 PILRAQ9UKJ1 303 aa3.55□□□□□ -1.84
NUP35-203ENST00000409798 A0A087WZY1 265 aa3.54□□□□□ -1.84
NUP35-203ENST00000409798 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.54□□□□□ -1.84
NUP35-203ENST00000409798 IGHV4-61A0A0C4DH41 118 aa3.54□□□□□ -1.84
NUP35-203ENST00000409798 ATP6AP2A0A1C7CYW4 349 aa3.54□□□□□ -1.84
NUP35-203ENST00000409798 XKRY2A2RUG3 117 aa3.54□□□□□ -1.84
NUP35-203ENST00000409798 NCF1BA6NI72 391 aaPredicted RBP3.54□□□□□ -1.84
NUP35-203ENST00000409798 NCF1CA8MVU1 366 aaPredicted RBP3.54□□□□□ -1.84
NUP35-203ENST00000409798 CHEK1O14757 476 aa3.54□□□□□ -1.84
NUP35-203ENST00000409798 MLNRO43193 412 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms