RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 NR0B2Q15466 257 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 BICRALQ6AI39 1079 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 IQCHQ86VS3 1027 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 OR2A12Q8NGT7 310 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 GNPDA2Q8TDQ7 276 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 GAL3ST3Q96A11 431 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 AURKBQ96GD4 344 aaPredicted RBP16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 ALPK1Q96QP1 1244 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 BOCQ9BWV1 1114 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 EHD1Q9H4M9 534 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 FZD3Q9NPG1 666 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 NPIPA1Q9UND3 350 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 E7EQ34 232 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 TLR4O00206 839 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 ATP12AP54707 1039 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 C15orf40Q8WUR7 153 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 CHCHD6Q9BRQ6 235 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 SP140LQ9H930 580 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 ALKBH4Q9NXW9 302 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 ANKMY1Q9P2S6 941 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 HMGA1P17096 107 aaKnown RBP16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 MAGEA8P43361 318 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 CASP9P55211 416 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 AP3S2P59780 193 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 SMPDL3BQ92485 455 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 TPK1Q9H3S4 243 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 DKKL1Q9UK85 242 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 ITIH1P19827 911 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 PGCP20142 388 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 BNIP3Q12983 259 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 PPP1R3AQ16821 1122 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 NEK7Q8TDX7 302 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 ACTR10Q9NZ32 417 aa16.07■□□□□ 0.16
PCDHA13-202ENST00000409494 ZNF831Q5JPB2 1677 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 SCAMP2O15127 329 aaKnown RBP16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 SLC6A11P48066 632 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 UGT3A2Q3SY77 523 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 TMEM52BQ4KMG9 183 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 ADNP2Q6IQ32 1131 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 RAB43Q86YS6 212 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 OR4K1Q8NGD4 311 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 OR56A3Q8NH54 315 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 TANKQ92844 425 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 SLC25A36Q96CQ1 311 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 TMEM74Q96NL1 305 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 LOXHD1Q8IVV2 1947 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 FAM92AA1XBS5 289 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 MUSKO15146 869 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 SLC22A1O15245 554 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 CPNE3O75131 537 aaKnown RBP16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 RPS17P08708 135 aaKnown RBP16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 C8orf89P0DMQ9 161 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 F3P13726 295 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 AOAHP28039 575 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 RAB25P57735 213 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 TLR1Q15399 786 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 SLC22A15Q8IZD6 547 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 OR10H4Q8NGA5 316 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 NSUN5Q96P11 429 aaKnown RBP16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 CMKLR1Q99788 373 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 C11orf16Q9NQ32 467 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 HCSTQ9UBK5 93 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 GIMAP2Q9UG22 337 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 GPR37L1O60883 481 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 ZNF821O75541 412 aaPredicted RBP16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 GNALP38405 381 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 ALDH3A2P51648 485 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 CBX3Q13185 183 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 SMAD4Q13485 552 aaKnown RBP16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 ABRAXAS2Q15018 415 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 IRF4Q15306 451 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 GPR153Q6NV75 609 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 ADAMTSL4Q6UY14 1074 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 ZSWIM3Q96MP5 696 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 PHF12Q96QT6 1004 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 HEBP1Q9NRV9 189 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 GIN1Q9NXP7 522 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 TMEM9Q9P0T7 183 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 PEX16Q9Y5Y5 336 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 POLR1CO15160 346 aaPredicted RBP16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 DBIP07108 87 aaKnown RBP16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 ZDHHC11BP0C7U3 371 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 TAS2R38P59533 333 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 GRIN2CQ14957 1233 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 UTP4Q969X6 686 aaKnown RBP16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 C12orf43Q96C57 262 aaKnown RBP16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 CNDP2Q96KP4 475 aaKnown RBP16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 DOHHQ9BU89 302 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 FTSJ1Q9UET6 329 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 DNAJC15Q9Y5T4 150 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 HS3ST3A1Q9Y663 406 aa16.06■□□□□ 0.16
PCDHA13-202ENST00000409494 FAAHO00519 579 aa16.05■□□□□ 0.16
PCDHA13-202ENST00000409494 KHNYNO15037 678 aaKnown RBP16.05■□□□□ 0.16
PCDHA13-202ENST00000409494 PLCXD2Q0VAA5 305 aa16.05■□□□□ 0.16
PCDHA13-202ENST00000409494 COLEC12Q5KU26 742 aa16.05■□□□□ 0.16
PCDHA13-202ENST00000409494 LRIF1Q5T3J3 769 aa16.05■□□□□ 0.16
PCDHA13-202ENST00000409494 C6orf120Q7Z4R8 191 aa16.05■□□□□ 0.16
PCDHA13-202ENST00000409494 HORMAD2Q8N7B1 307 aa16.05■□□□□ 0.16
PCDHA13-202ENST00000409494 ASB16Q96NS5 453 aa16.05■□□□□ 0.16
PCDHA13-202ENST00000409494 MAGIXQ9H6Y5 334 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms