RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 B4GALT7Q9UBV7 327 aa20.57■□□□□ 0.88
ANKRD28-201ENST00000399451 SOX1O00570 391 aaPredicted RBP20.57■□□□□ 0.88
ANKRD28-201ENST00000399451 IQCF3P0C7M6 154 aa20.57■□□□□ 0.88
ANKRD28-201ENST00000399451 TRAM1Q15629 374 aa20.57■□□□□ 0.88
ANKRD28-201ENST00000399451 FOXRED2Q8IWF2 684 aa20.57■□□□□ 0.88
ANKRD28-201ENST00000399451 MFSD2AQ8NA29 543 aa20.57■□□□□ 0.88
ANKRD28-201ENST00000399451 XKR8Q9H6D3 395 aa20.57■□□□□ 0.88
ANKRD28-201ENST00000399451 RETREG1Q9H6L5 497 aa20.57■□□□□ 0.88
ANKRD28-201ENST00000399451 TIGARQ9NQ88 270 aa20.57■□□□□ 0.88
ANKRD28-201ENST00000399451 C13orf42A0A1B0GVH6 325 aa20.57■□□□□ 0.88
ANKRD28-201ENST00000399451 H3BSH0 61 aa20.57■□□□□ 0.88
ANKRD28-201ENST00000399451 ZNF821O75541 412 aaPredicted RBP20.57■□□□□ 0.88
ANKRD28-201ENST00000399451 MECP2P51608 486 aaKnown RBP20.57■□□□□ 0.88
ANKRD28-201ENST00000399451 SLC39A5Q6ZMH5 540 aa20.57■□□□□ 0.88
ANKRD28-201ENST00000399451 I3L521 148 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 POU6F2P78424 691 aaPredicted RBP20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 NIPAL4Q0D2K0 466 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 MRPL49Q13405 166 aaKnown RBP20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 HACD2Q6Y1H2 254 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 THAP3Q8WTV1 239 aaPredicted RBP20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 BORCS8Q96FH0 119 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 NECTIN4Q96NY8 510 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 ZNF471Q9BX82 626 aaPredicted RBP20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 LOC100509620A0A075B734 347 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 A0A1B0GVI7 797 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 GLOD5A6NK44 160 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 NUAK1O60285 661 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 C6orf141Q5SZD1 244 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 KBTBD6Q86V97 674 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 FAM86B1Q8N7N1 296 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 RAB7BQ96AH8 199 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 ERVK-18Q9QC07 812 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 NPIPA2E9PIF3 369 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 NPIPA3F8WFD2 350 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 S1PR4O95977 384 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 PON2Q15165 354 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 WDTC1Q8N5D0 677 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 RFT1Q96AA3 541 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 C8orf33Q9H7E9 229 aaPredicted RBP20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 TAS2R9Q9NYW1 312 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 ZNF860A6NHJ4 632 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 GJB5O95377 273 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 GNG2P59768 71 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 IRF5Q13568 498 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 VMACQ2NL98 169 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 ZNF852Q6ZMS4 543 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 FCAMRQ8WWV6 532 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 PCDHGA2Q9Y5H1 932 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 DNMT3AQ9Y6K1 912 aaPredicted RBP20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 SMAD9O15198 467 aaKnown RBP20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 OR12D1P0DN82 309 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 LMAN2Q12907 356 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 STEAP4Q687X5 459 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 SIAH1Q8IUQ4 282 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 OR51G2Q8NGK0 314 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 C17orf50Q8WW18 174 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 PTCHD1Q96NR3 888 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 TRAM1L1Q8N609 369 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 DEFB126Q9BYW3 111 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 ABCD2Q9UBJ2 740 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 ZFR2Q9UPR6 939 aaKnown RBP20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 CARD8Q9Y2G2 431 aa20.56■□□□□ 0.88
ANKRD28-201ENST00000399451 EDNRBP24530 442 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 ETV3P41162 512 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 E2F1Q01094 437 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 SLC10A2Q12908 348 aaPredicted RBP20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 FAM76BQ5HYJ3 339 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 TMEM225Q6GV28 225 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 OR4K14Q8NGD5 310 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 AKAP1Q92667 903 aaKnown RBP eCLIP20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 ENY2Q9NPA8 101 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 AKAP12Q02952 1782 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 LTBP3Q9NS15 1303 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 A0A0G2JPF8 293 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 HNRNPCL3B7ZW38 293 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 SLC10A3P09131 477 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 HNRNPCL4P0DMR1 293 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 C1GALT1C1LP0DN25 315 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 PFKLP17858 780 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 FADDQ13158 208 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 BTBD16Q32M84 506 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 ZNF648Q5T619 568 aaPredicted RBP20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 LRRC69Q6ZNQ3 347 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 CDHR3Q6ZTQ4 885 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 UMODL1-AS1Q8N2C9 162 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 MINDY1Q8N5J2 469 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 SMARCD2Q92925 531 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 PCYT2Q99447 389 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 ZNF350Q9GZX5 532 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 SCP2D1Q9UJQ7 156 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 SH3D21A4FU49 640 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 HOXD8P13378 290 aaPredicted RBP20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 TIA1P31483 386 aaKnown RBP eCLIP20.55■□□□□ 0.884e-7■■■■□ 23.2
ANKRD28-201ENST00000399451 RPS15P62841 145 aaKnown RBP20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 PHOX2BQ99453 314 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 EXTL2Q9UBQ6 330 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 APOBEC3BQ9UH17 382 aaKnown RBP20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 HTR3EA5X5Y0 456 aa20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 FARS2O95363 451 aaKnown RBP20.55■□□□□ 0.88
ANKRD28-201ENST00000399451 MRPL3P09001 348 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms