RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TMEM240Q5SV17 173 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 UBE2J2Q8N2K1 259 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 RNF31Q96EP0 1072 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 MRPS30Q9NP92 439 aaKnown RBP9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 SPATA7Q9P0W8 599 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 SERGEFQ9UGK8 458 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 SERPINB1P30740 379 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 PCGF2P35227 344 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 IDUAP35475 653 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 UGT2B15P54855 530 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 SDE2Q6IQ49 451 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 LAIR2Q6ISS4 152 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 SLC9B2Q86UD5 537 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 CCDC103Q8IW40 242 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 TRIM48Q8IWZ4 208 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 DEPDC4Q8N2C3 294 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 OR2L2Q8NH16 312 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 SLC35G5Q96KT7 338 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 ART5Q96L15 291 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 PRSS16Q9NQE7 514 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 TAAR2Q9P1P5 351 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 HCN4Q9Y3Q4 1203 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 PLXNA3P51805 1871 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 TRBV4-1A0A0J9YWV2 114 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 A0A1W2PQU0 124 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 KRBA1A5PL33 1030 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 CARNS1A5YM72 827 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 KPNA4O00629 521 aaPredicted RBP9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 SLC16A6O15403 523 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 CAPN5O15484 640 aaPredicted RBP9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 TLX2O43763 284 aaPredicted RBP9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 JRKO75564 520 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 RASGRP1O95267 797 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 CPNE6O95741 557 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 GASTP01350 101 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 APODP05090 189 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 AK4P27144 223 aaPredicted RBP9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 HOXA9P31269 272 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 RYKP34925 604 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZNF542PQ5EBM4 170 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 TJAP1Q5JTD0 557 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 PNCKQ6P2M8 343 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 ENPP7Q6UWV6 458 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 TMEM107Q6UX40 140 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 PJA1Q8NG27 643 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZNF675Q8TD23 568 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 RELTQ969Z4 430 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 RGMAQ96B86 450 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZBED6CLQ96FA7 236 aaPredicted RBP9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 COQ10AQ96MF6 247 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZNF347Q96SE7 839 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZNF607Q96SK3 696 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 PIP5K1AQ99755 562 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 DPH7Q9BTV6 452 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 ITPAQ9BY32 194 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 NMNAT1Q9HAN9 279 aaPredicted RBP9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 MAFFQ9ULX9 164 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 WDR37Q9Y2I8 494 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 PCDHGA6Q9Y5G7 932 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 STON1Q9Y6Q2 735 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 LCMT2O60294 686 aaKnown RBP9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 ITIH1P19827 911 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 LIPAP38571 399 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 GJA8P48165 433 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 OLR1P78380 273 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 RUNX3Q13761 415 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 CAMK1Q14012 370 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 PTGES3Q15185 160 aaKnown RBP9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 CST6Q15828 149 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZNF630Q2M218 657 aaPredicted RBP9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 NDUFAF5Q5TEU4 345 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 SHFQ7M4L6 423 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 C16orf62Q7Z3J2 963 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 KRT73Q86Y46 540 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 NRSN1Q8IZ57 195 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 SLC38A5Q8WUX1 472 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 LCN9Q8WX39 176 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 TANKQ92844 425 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 HPS1Q92902 700 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 SH3YL1Q96HL8 342 aaPredicted RBP9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 QRFPRQ96P65 431 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 OR51I1Q9H343 314 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 GIMAP4Q9NUV9 329 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 MAPRE3Q9UPY8 281 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 POFUT2Q9Y2G5 429 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 SERPINB7O75635 380 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 HNRNPA1P09651 372 aaKnown RBP eCLIP9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 CISD3P0C7P0 127 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 GJA4P35212 333 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 BTN3A2P78410 334 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 SLAMF1Q13291 335 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 IL18R1Q13478 541 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 GBX1Q14549 363 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 PRSS53Q2L4Q9 553 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 PRSS36Q5K4E3 855 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 TMEFF1Q8IYR6 380 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 FRMD1Q8N878 549 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 INSM2Q96T92 566 aaPredicted RBP9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 GPATCH2Q9NW75 528 aa9.93□□□□□ -0.82
CPSF1P1-201ENST00000397477 DKK3Q9UBP4 350 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms