RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ATPAF1Q5TC12 328 aaPredicted RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 MED27Q6P2C8 311 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 UBAC2Q8NBM4 344 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 FBXO15Q8NCQ5 510 aaPredicted RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 CCDC74AQ96AQ1 378 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 MTFMTQ96DP5 389 aaKnown RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 TSSK6Q9BXA6 273 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 SHMT1P34896 483 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 SPIN4Q56A73 249 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 CNIH2Q6PI25 160 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 VRK3Q8IV63 474 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 OR56B1Q8NGI3 324 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 C7orf34Q96L11 122 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 ZNF587Q96SQ5 575 aaPredicted RBP6.38□□□□□ -1.39
UBR4-204ENST00000375254 PZPP20742 1482 aa6.38□□□□□ -1.39
UBR4-204ENST00000375254 LNP1A1A4G5 178 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 TRABD2BA6NFA1 517 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 KIAA1324LA8MWY0 1029 aaPredicted RBP6.37□□□□□ -1.39
UBR4-204ENST00000375254 PIP5K1BO14986 540 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 EFNA1P20827 205 aaPredicted RBP6.37□□□□□ -1.39
UBR4-204ENST00000375254 HMGCLP35914 325 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 KCNJ11Q14654 390 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 VASH1Q7L8A9 365 aaPredicted RBP6.37□□□□□ -1.39
UBR4-204ENST00000375254 PARGQ86W56 976 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 MR1Q95460 341 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 YTHDC2Q9H6S0 1430 aaKnown RBP6.37□□□□□ -1.39
UBR4-204ENST00000375254 MDFIC2A0A1B0GVS7 189 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 ADAMTS3O15072 1205 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 EEDO75530 441 aaKnown RBP6.37□□□□□ -1.39
UBR4-204ENST00000375254 SLITRK3O94933 977 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 CELP19835 753 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 RFC3P40938 356 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 MAP2K4P45985 399 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 KANSL3Q9P2N6 904 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 ANXA4P09525 319 aaPredicted RBP6.37□□□□□ -1.39
UBR4-204ENST00000375254 HSF1Q00613 529 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 KIAA1211LQ6NV74 962 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 OR6M1Q8NGM8 313 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 DUSP19Q8WTR2 217 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 EPYCQ99645 322 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 ZNF559Q9BR84 538 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 HIF3AQ9Y2N7 669 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 KHNYNO15037 678 aaKnown RBP6.37□□□□□ -1.39
UBR4-204ENST00000375254 RAB40BQ12829 278 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 MLLT11Q13015 90 aaPredicted RBP6.37□□□□□ -1.39
UBR4-204ENST00000375254 SCGB2A2Q13296 93 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 CPSF6Q16630 551 aaKnown RBP eCLIP6.37□□□□□ -1.39
UBR4-204ENST00000375254 NRARPQ7Z6K4 114 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 SIGLECL1Q8N7X8 197 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 RAB24Q969Q5 203 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 ENY2Q9NPA8 101 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 ZNF823P16415 610 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 FUT4P22083 530 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 RAB33AQ14088 237 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 CARD16Q5EG05 197 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 TCTE1Q5JU00 501 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 TEX261Q6UWH6 196 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 MPZL3Q6UWV2 235 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 KDF1Q8NAX2 398 aaPredicted RBP6.37□□□□□ -1.39
UBR4-204ENST00000375254 ACSF2Q96CM8 615 aaPredicted RBP6.37□□□□□ -1.39
UBR4-204ENST00000375254 BPIFA2Q96DR5 249 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 MAP6Q96JE9 813 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 EXO1Q9UQ84 846 aaKnown RBP6.37□□□□□ -1.39
UBR4-204ENST00000375254 U3KQ87 197 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 A0A0U1RQJ8 604 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 CHRM5P08912 532 aaPredicted RBP6.37□□□□□ -1.39
UBR4-204ENST00000375254 STAG3L1P0CL83 205 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 ARSBP15848 533 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 SEMA3BQ13214 749 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 ACOT1Q86TX2 421 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 SDCBP2Q9H190 292 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 PRDM12Q9H4Q4 367 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 METP08581 1390 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 FAM166BA8MTA8 275 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 WNT9AO14904 365 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 ENDOGQ14249 297 aaKnown RBP6.37□□□□□ -1.39
UBR4-204ENST00000375254 GRM3Q14832 879 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 CHRFAM7AQ494W8 412 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 CRY2Q49AN0 593 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 MINDY4Q4G0A6 757 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 LYSMD3Q7Z3D4 306 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 LURAP1LQ8IV03 231 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 TMEM218A2RU14 115 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 GPR89AB7ZAQ6 455 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 AP4M1O00189 453 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 GPR89BP0CG08 455 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 MTNR1AP48039 350 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 FOXO4P98177 505 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 FLYWCH1Q4VC44 716 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 LIPKQ5VXJ0 399 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 FAM58AQ8N1B3 248 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 TMEM86AQ8N2M4 240 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 KAZALD1Q96I82 304 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 UROC1Q96N76 676 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 ARHGDIGQ99819 225 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 C1QTNF7Q9BXJ2 289 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 SARDHQ9UL12 918 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 MAP4K5Q9Y4K4 846 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 ARHGAP5Q13017 1502 aa6.37□□□□□ -1.39
UBR4-204ENST00000375254 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms