RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 KCNN4O15554 427 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PMPCBO75439 489 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 RPP14O95059 124 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 NSA2O95478 260 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 CHRM2P08172 466 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 LINGO3P0C6S8 592 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 VCLP18206 1134 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 GABRB1P18505 474 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PRKCHP24723 683 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 ITPKBP27987 946 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 LCN1P31025 176 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 GKP32189 559 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PTH2RP49190 550 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 RGS7P49802 495 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 CCR4P51679 360 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 HNRNPKP61978 463 aaKnown RBP eCLIP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 DYNLL1P63167 89 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 B4GALNT1Q00973 533 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PLOD1Q02809 727 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 SCRN3Q0VDG4 424 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 SEMA3BQ13214 749 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PDCLQ13371 301 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PMS2P3Q13401 168 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 CUL3Q13618 768 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PGM5Q15124 567 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 SF3B4Q15427 424 aaKnown RBP eCLIP4.82□□□□□ -1.641e-9■■■■■ 43.2
ECHDC1-204ENST00000368292 PDK4Q16654 411 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 IFI44LQ53G44 452 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF667Q5HYK9 610 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 C6orf163Q5TEZ5 329 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 DGAT2L7PQ6IED9 249 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 FAM122CQ6P4D5 195 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 FAM171BQ6P995 826 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 FAM122BQ7Z309 247 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 VTCN1Q7Z7D3 282 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PEG10Q86TG7 708 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 WDR5BQ86VZ2 330 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 CLEC4FQ8N1N0 589 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF596Q8TC21 504 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 ING5Q8WYH8 240 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 OVCA2Q8WZ82 227 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 CIDECQ96AQ7 238 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 SLC25A36Q96CQ1 311 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 ZG16BQ96DA0 208 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PRR11Q96HE9 360 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 WDFY2Q96P53 400 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF317Q96PQ6 595 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PRR25Q96S07 402 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PAFAH2Q99487 392 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 CHP1Q99653 195 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 ASCL2Q99929 193 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 CITED1Q99966 193 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PIGQQ9BRB3 760 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 WDR83Q9BRX9 315 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 C6orf62Q9GZU0 229 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 CCDC134Q9H6E4 229 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 DHX33Q9H6R0 707 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PLEKHA2Q9HB19 425 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 KCNK9Q9NPC2 374 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 DMAP1Q9NPF5 467 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PNO1Q9NRX1 252 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF275Q9NSD4 429 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PNPLA3Q9NST1 481 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 LIN7CQ9NUP9 197 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PRMT7Q9NVM4 692 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 BEX4Q9NWD9 120 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 ERAP1Q9NZ08 941 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 SPG21Q9NZD8 308 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 ADAM18Q9Y3Q7 739 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 MFHAS1Q9Y4C4 1052 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PUS1Q9Y606 427 aaKnown RBP eCLIP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 GREB1LQ9C091 1923 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PLXNB3Q9ULL4 1909 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 LAMA4Q16363 1823 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 LOC100509620A0A075B734 347 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 SMCO2A6NFE2 343 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 A6NL46 340 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 C4orf47A7E2U8 309 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 BECN2A8MW95 431 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 TCP11X1B4DZS4 312 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 H0YJX3 145 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 NR5A2O00482 541 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 AIM2O14862 343 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 INPPL1O15357 1258 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 DENRO43583 198 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 SPRY1O43609 319 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 HSF2BPO75031 334 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 CDH16O75309 829 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 NDUFS6O75380 124 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 KAT7O95251 611 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 MBP02144 154 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 UBTFL1P0CB47 393 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 C8orf89P0DMQ9 161 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 RAB4AP20338 218 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 ATP6V1C1P21283 382 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 TUBG1P23258 451 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 PCSK6P29122 969 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 CRABP2P29373 138 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 CD40LGP29965 261 aa4.81□□□□□ -1.64
ECHDC1-204ENST00000368292 RYKP34925 604 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms