RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 LHCGRP22888 699 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 DGKGP49619 791 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 TAS2R41P59536 307 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 TBPL1P62380 186 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 MPPE1Q53F39 396 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF385BQ569K4 471 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 C22orf39Q6P5X5 142 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.28□□□□□ -1.4
CSDE1-203ENST00000358528 SYT14Q8NB59 555 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 FCRL4Q96PJ5 515 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 TEFMQ96QE5 360 aaKnown RBP6.28□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF607Q96SK3 696 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 NELL2Q99435 816 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 SYT17Q9BSW7 474 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 TRMT61BQ9BVS5 477 aaKnown RBP6.28□□□□□ -1.4
CSDE1-203ENST00000358528 TTTY10Q9BZA0 68 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 SPRTNQ9H040 489 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-203ENST00000358528 SERHL2Q9H4I8 314 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 RDH14Q9HBH5 336 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 AHSPQ9NZD4 102 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 ITM2BQ9Y287 266 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 ENPP4Q9Y6X5 453 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 CACNA1CQ13936 2221 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 CD8B2A6NJW9 211 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 SNTNA6NMZ2 147 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 FRS3O43559 492 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 C8orf89P0DMQ9 161 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 CD8BP10966 210 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 PAICSP22234 425 aaKnown RBP6.28□□□□□ -1.4
CSDE1-203ENST00000358528 IDSP22304 550 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 APEX1P27695 318 aaKnown RBP6.28□□□□□ -1.4
CSDE1-203ENST00000358528 PCGF2P35227 344 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 UGT2B10P36537 528 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 BMPR1AP36894 532 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 MAGEA2P43356 314 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 HTR3AP46098 478 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 SPINT3P49223 89 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 CCT3P49368 545 aaKnown RBP6.28□□□□□ -1.4
CSDE1-203ENST00000358528 MAN2A2P49641 1150 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 GNG2P59768 71 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 PFN3P60673 137 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 REEP3Q6NUK4 255 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 NPAS4Q8IUM7 802 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 ELMOD2Q8IZ81 293 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 Q8N402 240 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF461Q8TAF7 563 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 GANCQ8TET4 914 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 POF1BQ8WVV4 589 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 ASB15Q8WXK1 588 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 SCRN2Q96FV2 425 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 TMEM19Q96HH6 336 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 MRPL9Q9BYD2 267 aaKnown RBP6.28□□□□□ -1.4
CSDE1-203ENST00000358528 ZCCHC3Q9NUD5 404 aaKnown RBP6.28□□□□□ -1.4
CSDE1-203ENST00000358528 SATB2Q9UPW6 733 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 TRBV5-3A0A0A0MS03 114 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 LOC102723532A0A0G2JNH3 316 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 C2orf92A0A1B0GVN3 265 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 PRMT3O60678 531 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 PRAMEF4O60810 478 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 CD160O95971 181 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 SRCP12931 536 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 POLR2EP19388 210 aaKnown RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 SDHBP21912 280 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 PTX3P26022 381 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 AVPR1BP47901 424 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 FXNQ16595 210 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 PRAMEF9Q5VWM5 478 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 GDPD4Q6W3E5 623 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF730Q6ZMV8 503 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 LUZP2Q86TE4 346 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 NOXA1Q86UR1 476 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 AMIGO1Q86WK6 493 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 OR8H3Q8N146 312 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 SLC37A3Q8NCC5 494 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 IL17RDQ8NFM7 739 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 JPH3Q8WXH2 748 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 LINC01599Q8WXQ3 324 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 AP3S1Q92572 193 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 SNAPC3Q92966 411 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 C7orf34Q96L11 122 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 ZFP3Q96NJ6 502 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 PRR14Q9BWN1 585 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 C11orf54Q9H0W9 315 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 ZDHHC4Q9NPG8 344 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 ZC4H2Q9NQZ6 224 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 MARCH5Q9NX47 278 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 CCDC59Q9P031 241 aaKnown RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 STUB1Q9UNE7 303 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 NEUROG3Q9Y4Z2 214 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 ANHXE9PGG2 379 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 HOXC11O43248 304 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 NOS1APO75052 506 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-203ENST00000358528 OR12D1P0DN82 309 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 SELPP16109 830 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 CD22P20273 847 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 SSR2P43308 183 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 IFITM2Q01629 132 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 KCNC4Q03721 635 aa6.27□□□□□ -1.41
CSDE1-203ENST00000358528 ZNF91Q05481 1191 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms