RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 GADD45GO95257 159 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 ITGA2P17301 1181 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 CBLP22681 906 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 DGKEP52429 567 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 SYT16Q17RD7 645 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 UTP15Q8TED0 518 aaKnown RBP14.68□□□□□ -0.06
UPF3B-202ENST00000345865 OR5P2Q8WZ92 322 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 SMPDL3AQ92484 453 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 EXOSC8Q96B26 276 aaKnown RBP14.68□□□□□ -0.06
UPF3B-202ENST00000345865 SERHL2Q9H4I8 314 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 XKR8Q9H6D3 395 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 PLCXD1Q9NUJ7 323 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 FKBP14Q9NWM8 211 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 ZFR2Q9UPR6 939 aaKnown RBP14.68□□□□□ -0.06
UPF3B-202ENST00000345865 PLEKHM1Q9Y4G2 1056 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 STON1Q9Y6Q2 735 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 CKAP5Q14008 2032 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 PDPK1O15530 556 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 SULT1C4O75897 302 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 GASTP01350 101 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 IFNA14P01570 189 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 STATHP02808 62 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 ACP5P13686 325 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 CD36P16671 472 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 FRKP42685 505 aaPredicted RBP14.67□□□□□ -0.06
UPF3B-202ENST00000345865 CSNK1G2P78368 415 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 OCA2Q04671 838 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 IRF4Q15306 451 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 CST6Q15828 149 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 MLIPQ5VWP3 458 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 ZNF770Q6IQ21 691 aaPredicted RBP14.67□□□□□ -0.06
UPF3B-202ENST00000345865 LGALS12Q96DT0 336 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 TMEM19Q96HH6 336 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 TEFMQ96QE5 360 aaKnown RBP14.67□□□□□ -0.06
UPF3B-202ENST00000345865 AKIP1Q9NQ31 210 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 GPR83Q9NYM4 423 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 SPATA7Q9P0W8 599 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 HCN4Q9Y3Q4 1203 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 A0A1W2PP55 124 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 PRAMEF27A3QJZ7 478 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 CLCA1A8K7I4 914 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 M0R3G1 203 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 KMOO15229 486 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 TBX19O60806 448 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 SLC35G4P0C7Q5 338 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 RHCEP18577 417 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 CXCR2P25025 360 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 CSNK2BP67870 215 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 ITGADQ13349 1161 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 HEPACAMQ14CZ8 416 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 PTGES3Q15185 160 aaKnown RBP14.67□□□□□ -0.06
UPF3B-202ENST00000345865 TBC1D25Q3MII6 688 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 FAM46CQ5VWP2 391 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 C6orf120Q7Z4R8 191 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 CENPSQ8N2Z9 138 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 AQP11Q8NBQ7 271 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 TP53I13Q8NBR0 393 aaPredicted RBP14.67□□□□□ -0.06
UPF3B-202ENST00000345865 VMP1Q96GC9 406 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 ALPK1Q96QP1 1244 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 MACROD1Q9BQ69 325 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 TRPV4Q9HBA0 871 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 PALMDQ9NP74 551 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 KCND3Q9UK17 655 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 ERGIC3Q9Y282 383 aa14.67□□□□□ -0.06
UPF3B-202ENST00000345865 A8MVJ9 347 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 HMGN4O00479 90 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 NDUFS4O43181 175 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 MFN2O95140 757 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 NADKO95544 446 aaPredicted RBP14.66□□□□□ -0.06
UPF3B-202ENST00000345865 RPN2P04844 631 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 CDK1P06493 297 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 ADRA2AP08913 450 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 HOXB3P14651 431 aaPredicted RBP14.66□□□□□ -0.06
UPF3B-202ENST00000345865 ZNF12P17014 697 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 CD72P21854 359 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 TRIM23P36406 574 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 DUSP6Q16828 381 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 KLHL17Q6TDP4 642 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 PAGE2Q7Z2X7 111 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 UBE2Q1Q7Z7E8 422 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 RBM45Q8IUH3 476 aaKnown RBP14.66□□□□□ -0.06
UPF3B-202ENST00000345865 TMCO5AQ8N6Q1 288 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 OR4D11Q8NGI4 311 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 OR2A1Q8NGT9 310 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 CREB3L4Q8TEY5 395 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 PHF10Q8WUB8 498 aaKnown RBP14.66□□□□□ -0.06
UPF3B-202ENST00000345865 C12orf66Q96MD2 445 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 FERD3LQ96RJ6 166 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 OSGEPL1Q9H4B0 414 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 WDR26Q9H7D7 661 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 NMNAT1Q9HAN9 279 aaPredicted RBP14.66□□□□□ -0.06
UPF3B-202ENST00000345865 A4GALTQ9NPC4 353 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 KCNK6Q9Y257 313 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 DNMT3AQ9Y6K1 912 aaPredicted RBP14.66□□□□□ -0.06
UPF3B-202ENST00000345865 TRBV4-1A0A0J9YWV2 114 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 CLDN25C9JDP6 229 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 PRKRAO75569 313 aaKnown RBP14.66□□□□□ -0.06
UPF3B-202ENST00000345865 CCNB2O95067 398 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 IFNW1P05000 195 aa14.66□□□□□ -0.06
UPF3B-202ENST00000345865 STSP08842 583 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms