RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 MRPS2Q9Y399 296 aaKnown RBP20.84■□□□□ 0.93
CACNB1-201ENST00000344140 SPACA6W5XKT8 324 aa20.84■□□□□ 0.93
CACNB1-201ENST00000344140 CUL9Q8IWT3 2517 aa20.83■□□□□ 0.93
CACNB1-201ENST00000344140 GLOD5A6NK44 160 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 PGRMC2O15173 223 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 GALR3O60755 368 aaPredicted RBP20.83■□□□□ 0.92
CACNB1-201ENST00000344140 NTRK1P04629 796 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 IL1RNP18510 177 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 CPN2P22792 545 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 CD1CP29017 333 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 CHI3L1P36222 383 aaPredicted RBP20.83■□□□□ 0.92
CACNB1-201ENST00000344140 LIM2P55344 173 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 SKP1P63208 163 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 RGNQ15493 299 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 NDUFA9Q16795 377 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 NIPAL1Q6NVV3 410 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 C10orf111Q8N326 155 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 PSMA8Q8TAA3 256 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 FIG4Q92562 907 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 UCN3Q969E3 161 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 POP5Q969H6 163 aaKnown RBP20.83■□□□□ 0.92
CACNB1-201ENST00000344140 CCDC74AQ96AQ1 378 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 BBS4Q96RK4 519 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 NPLQ9BXD5 320 aaPredicted RBP20.83■□□□□ 0.92
CACNB1-201ENST00000344140 TRIM4Q9C037 500 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 CCM2LQ9NUG4 571 aaPredicted RBP20.83■□□□□ 0.92
CACNB1-201ENST00000344140 RAB23Q9ULC3 237 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 ENTPD4Q9Y227 616 aa20.83■□□□□ 0.92
CACNB1-201ENST00000344140 MN1Q10571 1320 aaPredicted RBP20.83■□□□□ 0.92
CACNB1-201ENST00000344140 TCRBV5S2A0A599 114 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 PATE3B3GLJ2 98 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 CXCR6O00574 342 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 SIGLEC6O43699 453 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 KCNK5O95279 499 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 SOAT1P35610 550 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 GABRA4P48169 554 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 SNRPNP63162 240 aaKnown RBP20.82■□□□□ 0.92
CACNB1-201ENST00000344140 VAC14Q08AM6 782 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 FADDQ13158 208 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 RUNX2Q13950 521 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 TCTE1Q5JU00 501 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 FAM180BQ6P0A1 224 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 RNF111Q6ZNA4 994 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 ZNF551Q7Z340 670 aaPredicted RBP20.82■□□□□ 0.92
CACNB1-201ENST00000344140 SPRED1Q7Z699 444 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 ARHGEF39Q8N4T4 335 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 OR52N2Q8NGI0 321 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 PNPT1Q8TCS8 783 aaKnown RBP20.82■□□□□ 0.92
CACNB1-201ENST00000344140 CANT1Q8WVQ1 401 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 KLHL6Q8WZ60 621 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 AMDHD1Q96NU7 426 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 CXorf36Q9H7Y0 433 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 ANKHQ9HCJ1 492 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 STARD5Q9NSY2 213 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 ARMC1Q9NVT9 282 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 SEMA5BQ9P283 1151 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 NAALAD2Q9Y3Q0 740 aa20.82■□□□□ 0.92
CACNB1-201ENST00000344140 MYO1GB0I1T2 1018 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 PRKRAO75569 313 aaKnown RBP20.81■□□□□ 0.92
CACNB1-201ENST00000344140 MYF5P13349 255 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 IL10P22301 178 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 VHLP40337 213 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 LPAL2Q16609 132 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 SAMD14Q8IZD0 417 aaPredicted RBP20.81■□□□□ 0.92
CACNB1-201ENST00000344140 CLEC4FQ8N1N0 589 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 SLCO4A1Q96BD0 722 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 LOXL4Q96JB6 756 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 KLHL3Q9UH77 587 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 SNX8Q9Y5X2 465 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 ERAL1O75616 437 aaKnown RBP20.81■□□□□ 0.92
CACNB1-201ENST00000344140 ARL4DP49703 201 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 HSD11B2P80365 405 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 CFHR1Q03591 330 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 HSPB3Q12988 150 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 SPIDRQ14159 915 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 VMACQ2NL98 169 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 GARNL3Q5VVW2 1013 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 OR52E8Q6IFG1 317 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 ANGPTL8Q6UXH0 198 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 PDSS2Q86YH6 399 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 PRSS33Q8NF86 280 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 N4BP2L2Q92802 583 aaPredicted RBP20.81■□□□□ 0.92
CACNB1-201ENST00000344140 NCLNQ969V3 563 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 CHST8Q9H2A9 424 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 GLIPR2Q9H4G4 154 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 ZNF780BQ9Y6R6 833 aa20.81■□□□□ 0.92
CACNB1-201ENST00000344140 RNF103-CHMP3A0A140T963 221 aa20.8■□□□□ 0.92
CACNB1-201ENST00000344140 PCDHGA12O60330 932 aa20.8■□□□□ 0.92
CACNB1-201ENST00000344140 C1QCP02747 245 aa20.8■□□□□ 0.92
CACNB1-201ENST00000344140 RETP07949 1114 aa20.8■□□□□ 0.92
CACNB1-201ENST00000344140 CSNK2A2P19784 350 aaPredicted RBP20.8■□□□□ 0.92
CACNB1-201ENST00000344140 NCBP2P52298 156 aaKnown RBP eCLIP20.8■□□□□ 0.92
CACNB1-201ENST00000344140 SQSTM1Q13501 440 aa20.8■□□□□ 0.92
CACNB1-201ENST00000344140 CEBPEQ15744 281 aa20.8■□□□□ 0.92
CACNB1-201ENST00000344140 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.8■□□□□ 0.92
CACNB1-201ENST00000344140 USP53Q70EK8 1073 aa20.8■□□□□ 0.92
CACNB1-201ENST00000344140 PRSS42Q7Z5A4 293 aa20.8■□□□□ 0.92
CACNB1-201ENST00000344140 KMT5CQ86Y97 462 aa20.8■□□□□ 0.92
CACNB1-201ENST00000344140 TMEM126BQ8IUX1 230 aa20.8■□□□□ 0.92
CACNB1-201ENST00000344140 ZZZ3Q8IYH5 903 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms