RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 FAUP35544 74 aaKnown RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 YPEL5P62699 121 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 IL18Q14116 193 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 LIN52Q52LA3 116 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 FBXO42Q6P3S6 717 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 FRMD7Q6ZUT3 714 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 MCATQ8IVS2 390 aaKnown RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ZZZ3Q8IYH5 903 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 C1orf216Q8TAB5 229 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 COX4I2Q96KJ9 171 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 CGREF1Q99674 301 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 NPLQ9BXD5 320 aaPredicted RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 NLGN3Q9NZ94 848 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 EIF3KQ9UBQ5 218 aaKnown RBP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 GPR89AB7ZAQ6 455 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 M0QX08 132 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ITGA5P08648 1049 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 GPR89BP0CG08 455 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 HOXA9P31269 272 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 EPHA4P54764 986 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 DNAJB13P59910 316 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 SMCO1Q147U7 214 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 KIR2DS3Q14952 304 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 SF3B4Q15427 424 aaKnown RBP eCLIP10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 ODF4Q2M2E3 257 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 C6orf132Q5T0Z8 1188 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 KRTCAP2Q8N6L1 136 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 MDGA1Q8NFP4 955 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 OR2L3Q8NG85 312 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 RDH14Q9HBH5 336 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 LAMP5Q9UJQ1 280 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 PCDHB14Q9Y5E9 798 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 PCDHGA6Q9Y5G7 932 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 AP4B1Q9Y6B7 739 aa10.25□□□□□ -0.77
SYNPO2-201ENST00000307142 PRAMEF2O60811 474 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 ANGPTL1O95841 491 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 CSTBP04080 98 aaKnown RBP10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 BNIP1Q12981 228 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 C6orf52Q5T4I8 152 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 TMEM214Q6NUQ4 689 aaKnown RBP10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 FANK1Q8TC84 345 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 DDIT4LQ96D03 193 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 STRA6Q9BX79 667 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 DENND2DQ9H6A0 471 aaPredicted RBP10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 SRPK3Q9UPE1 567 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 C17orf105B2RV13 164 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 ZNF670-ZNF695F2Z2N8 137 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 PGCP20142 388 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 ARF5P84085 180 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 DMPKQ09013 629 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 C18orf21Q32NC0 220 aaPredicted RBP10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 GPR107Q5VW38 600 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 NADSYN1Q6IA69 706 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 GPR26Q8NDV2 337 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 ALOXE3Q9BYJ1 711 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 TRBV11-1A0A0K0K1C0 115 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 SCRG1O75711 98 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 GJB3O75712 270 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 ENTPD1P49961 510 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 CCL11P51671 97 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 GTF2IRD2BQ6EKJ0 949 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 REEP3Q6NUK4 255 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 GTF2IRD2Q86UP8 949 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 SLC39A3Q9BRY0 314 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 OR51I1Q9H343 314 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 CWH43Q9H720 699 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 HMGB3O15347 200 aaKnown RBP10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 ABCB7O75027 752 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 IFI30P13284 250 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 TGFBR2P37173 567 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 SGSHP51688 502 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 TXNL4AP83876 142 aaKnown RBP10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 ABHD18Q0P651 414 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 ABRAXAS2Q15018 415 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 B3GNT9Q6UX72 402 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 IQCF2Q8IXL9 164 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 PRR22Q8IZ63 422 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 GPR137CQ8N3F9 429 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 BOLLQ8N9W6 283 aaKnown RBP10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 AQP11Q8NBQ7 271 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 OR52B2Q96RD2 323 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 SLC22A12Q96S37 553 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 TMEM109Q9BVC6 243 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 POLDIP3Q9BY77 421 aaKnown RBP10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 PDE10AQ9Y233 779 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 SESN1Q9Y6P5 492 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 HAT1O14929 419 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 SLC22A2O15244 555 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 SLC16A8O95907 504 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 HMGN1P05114 100 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 HCKP08631 526 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 PSMA1P25786 263 aaKnown RBP10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 SERTAD2Q14140 314 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 RAB41Q5JT25 222 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 IER5LQ5T953 404 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 OLFML2AQ68BL7 652 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 LGI4Q8N135 537 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 OR2L2Q8NH16 312 aa10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 CENPNQ96H22 339 aaPredicted RBP10.24□□□□□ -0.77
SYNPO2-201ENST00000307142 TBX21Q9UL17 535 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms