RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SYN1P17600 705 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 ELK4P28324 431 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 OR1E2P47887 323 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 LRIF1Q5T3J3 769 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 PRAMEF17Q5VTA0 474 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 CRTC1Q6UUV9 634 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 ASB18Q6ZVZ8 466 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 SCD5Q86SK9 330 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 RASGEF1AQ8N9B8 481 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 KDM1BQ8NB78 822 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 HUS1BQ8NHY5 278 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 BRF2Q9HAW0 419 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 FANCFQ9NPI8 374 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 ARMC1Q9NVT9 282 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF224Q9NZL3 707 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 AP1M2Q9Y6Q5 423 aa12.27□□□□□ -0.45
PTCD1-201ENST00000292478 A0A1W2PPW3 197 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 HEPACAM2A8MVW5 462 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 MRPS14O60783 128 aaKnown RBP12.26□□□□□ -0.45
PTCD1-201ENST00000292478 C6P13671 934 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 NPRL3Q12980 569 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 GHDCQ8N2G8 530 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 CREB3L1Q96BA8 519 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 FAM118AQ9NWS6 357 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 SH3D21A4FU49 640 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 TNFRSF10BO14763 440 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 XPNPEP2O43895 674 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 PABPC4LP0CB38 370 aaKnown RBP12.26□□□□□ -0.45
PTCD1-201ENST00000292478 MYF6P23409 242 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 OR4D2P58180 307 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 RAB6CQ53S08 254 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 TMEM156Q8N614 296 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 SETD6Q8TBK2 473 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 RAB6CQ9H0N0 254 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 KANTRA0A1W2PQU2 76 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 BLOC1S5-TXNDC5H3BN57 136 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 IFNA21P01568 189 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 DCKP27707 260 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 ARF5P84085 180 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 PON2Q15165 354 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF181Q2M3W8 571 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 INO80EQ8NBZ0 244 aaPredicted RBP12.26□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF296Q8WUU4 475 aaPredicted RBP12.26□□□□□ -0.45
PTCD1-201ENST00000292478 ISG20Q96AZ6 181 aaKnown RBP12.26□□□□□ -0.45
PTCD1-201ENST00000292478 METTL2AQ96IZ6 378 aaKnown RBP12.26□□□□□ -0.45
PTCD1-201ENST00000292478 DMRTB1Q96MA1 342 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 FRMD6Q96NE9 622 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 C8orf33Q9H7E9 229 aaPredicted RBP12.26□□□□□ -0.45
PTCD1-201ENST00000292478 SDR39U1Q9NRG7 319 aaPredicted RBP12.26□□□□□ -0.45
PTCD1-201ENST00000292478 SCML1Q9UN30 329 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 PSMD9O00233 223 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 S100A6P06703 90 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 STOMP27105 288 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 GAS6Q14393 721 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 GBX1Q14549 363 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 EIF5AL1Q6IS14 154 aaKnown RBP12.26□□□□□ -0.45
PTCD1-201ENST00000292478 STX12Q86Y82 276 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 CCDC54Q8NEL0 328 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 OR52B6Q8NGF0 335 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 MCCC2Q9HCC0 563 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 NENFQ9UMX5 172 aa12.26□□□□□ -0.45
PTCD1-201ENST00000292478 A0A0G2JPF8 293 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 A0A1B0GVI7 797 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 A0A1W2PP55 124 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 HNRNPCL3B7ZW38 293 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 RETP07949 1114 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 HNRNPCL4P0DMR1 293 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 TCEA1P23193 301 aaKnown RBP12.25□□□□□ -0.45
PTCD1-201ENST00000292478 GSTM2P28161 218 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 DUSP3P51452 185 aaPredicted RBP12.25□□□□□ -0.45
PTCD1-201ENST00000292478 OC90Q02509 493 aaPredicted RBP12.25□□□□□ -0.45
PTCD1-201ENST00000292478 PHF19Q5T6S3 580 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF613Q6PF04 617 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 LRRTM3Q86VH5 581 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 SGIP1Q9BQI5 828 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 TRPV4Q9HBA0 871 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 CSNK1G1Q9HCP0 422 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 A0A1W2PQU0 124 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 C5orf51A6NDU8 294 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 PEX12O00623 359 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 MAN2B1O00754 1011 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 RNH1P13489 461 aaKnown RBP12.25□□□□□ -0.45
PTCD1-201ENST00000292478 CSF2RAP15509 400 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 SLC6A9P48067 706 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 CSNK1DP48730 415 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 INHBCP55103 352 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 ERVPABLB-1P60509 514 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 NFE2L1Q14494 772 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 CATSPEREQ5SY80 951 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 KCTD18Q6PI47 426 aaPredicted RBP12.25□□□□□ -0.45
PTCD1-201ENST00000292478 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTCD1-201ENST00000292478 ZNF101Q8IZC7 436 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 POLDIP3Q9BY77 421 aaKnown RBP12.25□□□□□ -0.45
PTCD1-201ENST00000292478 XKR8Q9H6D3 395 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 DISC1C4P0D8 188 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 LRRN3E7EW58 273 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 MUSKO15146 869 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 TSPAN9O75954 239 aa12.25□□□□□ -0.45
PTCD1-201ENST00000292478 CSTBP04080 98 aaKnown RBP12.25□□□□□ -0.45
PTCD1-201ENST00000292478 SRCP12931 536 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms