RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gm11237F2Z3W5 360 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gm11238F2Z478 360 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 S100a6P14069 89 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Pou3f3P31361 497 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Tsc22d1P62500 1077 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Csnk2bP67871 215 aaKnown RBP11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Adra1bP97717 514 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 ChatQ03059 641 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Cd244Q07763 397 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Q3TYS2 187 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gm428Q3UTE2 360 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 H2-Q2Q4KN81 360 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gm11487Q5RIS0 354 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Zp1Q62005 623 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Pon2Q62086 354 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Pan3Q640Q5 837 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Ces5aQ6AW46 575 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Szrd1Q6NXN1 152 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Zc3h11aQ6NZF1 792 aaKnown RBP11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Them6Q80ZW2 207 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Prr11Q8BHE0 368 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Itih5Q8BJD1 952 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 IfnzQ8BQT1 182 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Mblac1Q8BWY4 260 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Dppa4Q8CCG4 296 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gm13278Q8CD73 182 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 TrhdeQ8K093 1025 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Mcfd2Q8K5B2 145 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Stx19Q8R1Q0 292 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 FggQ8VCM7 436 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Olfr986Q8VFN6 312 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Nphs2Q91X05 385 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Sec23bQ9D662 767 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Isoc2bQ9DCC7 210 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Rhox2dW4VSN9 191 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Unc13cQ8K0T7 2210 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 BC034090A0A087WP46 1202 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 4930444G20RikD3Z741 495 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gm17555F6U8B9 371 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 CenpcP49452 906 aaKnown RBP11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Rab8bP61028 207 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 PtnP63089 168 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Coq7P97478 217 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Cyp1b1Q64429 543 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 AptxQ7TQC5 342 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Ppp1r15bQ8BFW3 697 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Ubash3bQ8BGG7 638 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Clrn3Q8BHH8 226 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 B4gat1Q8BWP8 415 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Pphln1Q8K2H1 381 aaKnown RBP11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Fmo2Q8K2I3 535 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Tmem98Q91X86 226 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Mcoln1Q99J21 580 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Slc25a46Q9CQS4 418 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Rps19Q9CZX8 145 aaKnown RBP11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Q9D112 206 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 4930578G10RikQ9D4Q4 153 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 MsraQ9D6Y7 233 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Aloxe3Q9WV07 711 aa11.08□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Olfr316A0A0N4SVP2 306 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Trmt1lA2RSY6 728 aaKnown RBP11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Tex16F6WNY1 1150 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Vmn1r16K7N775 303 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 LdhcP00342 332 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 C9P06683 548 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Opn1swP51491 346 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 MedagQ14BA6 303 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Olfr318Q5NCD7 306 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Rftn1Q6A0D4 554 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gm5416Q6IE28 97 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Tas2r140Q7TQA4 312 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Tmem202Q80W35 275 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 1700001K19RikQ80ZT1 219 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Slitrk5Q810B7 957 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 GalpQ810H5 117 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Commd7Q8BG94 200 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Enpp6Q8BGN3 440 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Plekhs1Q8BW88 474 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Rgs8Q8BXT1 180 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Chpt1Q8C025 398 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Bpifb2Q8C1E1 462 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Csnk1g3Q8C4X2 424 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Fbxl22Q8C7B6 236 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Cyp51a1Q8K0C4 503 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Pex16Q91XC9 336 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Use1Q9CQ56 270 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Sohlh2Q9D489 467 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 DstnQ9R0P5 165 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Plxna3P70208 1872 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Hpse2B2RY83 592 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Pgbd5D3YZI9 523 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gm2956E9PVJ0 216 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gm5796E9Q7M8 205 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Spata31d1cE9QAF1 853 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Prss56F2YMG0 604 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gm3629K7N6Y2 205 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gm10340K7N708 205 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 Gm8108K7N734 216 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 H2-Q1O19441 368 aa11.07□□□□□ -0.64
Col9a1-202ENSMUST00000088349 NsmafO35242 920 aa11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms