RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 E2F2Q14209 437 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 AAK1Q2M2I8 961 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 EXOC3L2Q2M3D2 409 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 FAM214AQ32MH5 1076 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 ZNF551Q7Z340 670 aaPredicted RBP16.84■□□□□ 0.29
SCARB2-223ENST00000640640 LSMEM2Q8N112 164 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 NR4A3Q92570 626 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 RNF31Q96EP0 1072 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 PDLIM5Q96HC4 596 aaKnown RBP16.84■□□□□ 0.29
SCARB2-223ENST00000640640 INPP5KQ9BT40 448 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 MKL2Q9ULH7 1088 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 IGLV3-10A0A075B6K4 115 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 CD2P06729 351 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 CTSCP53634 463 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 RPS3AP61247 264 aaKnown RBP16.84■□□□□ 0.29
SCARB2-223ENST00000640640 PIGFQ07326 219 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 IDNKQ5T6J7 187 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 MEIOBQ8N635 442 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 NUP43Q8NFH3 380 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 OR5AR1Q8NGP9 310 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 MAL2Q969L2 176 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 SLC25A36Q96CQ1 311 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 COMMD9Q9P000 198 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 LIPT1Q9Y234 373 aa16.84■□□□□ 0.29
SCARB2-223ENST00000640640 HMX2A2RU54 273 aa16.83■□□□□ 0.29
SCARB2-223ENST00000640640 RLN1P04808 185 aa16.83■□□□□ 0.29
SCARB2-223ENST00000640640 DRD2P14416 443 aa16.83■□□□□ 0.29
SCARB2-223ENST00000640640 ARRB1P49407 418 aaPredicted RBP16.83■□□□□ 0.29
SCARB2-223ENST00000640640 VSX2P58304 361 aaPredicted RBP16.83■□□□□ 0.29
SCARB2-223ENST00000640640 RPA4Q13156 261 aa16.83■□□□□ 0.29
SCARB2-223ENST00000640640 C1orf61Q13536 156 aa16.83■□□□□ 0.29
SCARB2-223ENST00000640640 ARL9Q6T311 187 aa16.83■□□□□ 0.29
SCARB2-223ENST00000640640 GKN2Q86XP6 184 aa16.83■□□□□ 0.29
SCARB2-223ENST00000640640 OR8K5Q8NH50 307 aa16.83■□□□□ 0.29
SCARB2-223ENST00000640640 C16orf78Q8WTQ4 265 aa16.83■□□□□ 0.29
SCARB2-223ENST00000640640 RETP07949 1114 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 ARSAP15289 507 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 ZNF823P16415 610 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 CXCR1P25024 350 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 ITGB7P26010 798 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 GBX2P52951 348 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-223ENST00000640640 NRG3P56975 720 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 ZNF267Q14586 743 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-223ENST00000640640 PTPRRQ15256 657 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 ZFP69Q49AA0 526 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 TMEM35AQ53FP2 167 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 TPRG1LQ5T0D9 272 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 PARS2Q7L3T8 475 aaKnown RBP16.83■□□□□ 0.28
SCARB2-223ENST00000640640 MYLIPQ8WY64 445 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 FEVQ99581 238 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 COMMD4Q9H0A8 199 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 NLGN3Q9NZ94 848 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 CYP8B1Q9UNU6 501 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 NME7Q9Y5B8 376 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 TCRBV21S2A2A0A5A6 115 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 OR6C74A6NCV1 312 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 GRXCR2A6NFK2 248 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 SCDO00767 359 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 EMC8O43402 210 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 VBP1P61758 197 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 MLLT1Q03111 559 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-223ENST00000640640 ZNF404Q494X3 552 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 DPPA4Q7L190 304 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 KRT77Q7Z794 578 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 MARCH9Q86YJ5 346 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 DEFB119Q8N690 84 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 OR52N2Q8NGI0 321 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 FOXJ1Q92949 421 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 SHDQ96IW2 340 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 HHIPL1Q96JK4 782 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 ZFP3Q96NJ6 502 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 ACPTQ9BZG2 426 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 PCDHGB1Q9Y5G3 927 aa16.83■□□□□ 0.28
SCARB2-223ENST00000640640 OR5K4A6NMS3 321 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 A8MU76 341 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 PCDHGA12O60330 932 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 RENP00797 406 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 CFIP05156 583 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 ALDOCP09972 364 aaKnown RBP16.82■□□□□ 0.28
SCARB2-223ENST00000640640 DHPSP49366 369 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-223ENST00000640640 MOGQ16653 247 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 DECR1Q16698 335 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 ARMCX6Q7L4S7 300 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 ATCAYQ86WG3 371 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 NETO1Q8TDF5 533 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 NEIL2Q969S2 332 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 RBCK1Q9BYM8 510 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 OR51I1Q9H343 314 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 CWH43Q9H720 699 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 TCF7L1Q9HCS4 588 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 IQCMA0A1B0GVH7 501 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 TIMP2P16035 220 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 RPL34P49207 117 aaKnown RBP16.82■□□□□ 0.28
SCARB2-223ENST00000640640 ZNF829Q3KNS6 432 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-223ENST00000640640 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.82■□□□□ 0.28
SCARB2-223ENST00000640640 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.82■□□□□ 0.285e-8■■■■□ 23.5
SCARB2-223ENST00000640640 GPER1Q99527 375 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 HCFC2Q9Y5Z7 792 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 RREB1Q92766 1687 aa16.82■□□□□ 0.28
SCARB2-223ENST00000640640 PTNP21246 168 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms