RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 TMEM198Q66K66 360 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 C18orf63Q68DL7 685 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 NXNQ6DKJ4 435 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 FAM71E1Q6IPT2 247 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 RIPOR1Q6ZS17 1223 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 IKBIPQ70UQ0 350 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 TMEM151BQ8IW70 566 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 TMEM52Q8NDY8 209 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 C10orf82Q8WW14 230 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 EGLN2Q96KS0 407 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 TMEM120AQ9BXJ8 343 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 NSRP1Q9H0G5 558 aaKnown RBP11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 ACTL8Q9H568 366 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 PRDM9Q9NQV7 894 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 C14orf105Q9NVL8 296 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 AIG1Q9NVV5 245 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 CROTQ9UKG9 612 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 NXT1Q9UKK6 140 aaKnown RBP11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 EIF3LQ9Y262 564 aaKnown RBP11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 PCDHGA6Q9Y5G7 932 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 PCDHA9Q9Y5H5 950 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 CLDN16Q9Y5I7 305 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 GPR45Q9Y5Y3 372 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 SPACA6W5XKT8 324 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 SEC16AO15027 2179 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 AKAP13Q12802 2813 aa11.92□□□□□ -0.5
CHMP2A-206ENST00000600118 FER1L5A0AVI2 2057 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 BLACEA4D250 179 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 PSMD12O00232 456 aaPredicted RBP11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 SNX3O60493 162 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 RECKO95980 971 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 CYC1P08574 325 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 IL3P08700 152 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 CD63P08962 238 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 NR2F6P10588 404 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 DRD2P14416 443 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 TCN2P20062 427 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 JAK1P23458 1154 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 F8A1P23610 371 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 BUD31P41223 144 aaPredicted RBP11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 MRPL19P49406 292 aaKnown RBP11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 ARFIP2P53365 341 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 PCBP4P57723 403 aaKnown RBP11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 FOXL2P58012 376 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 C21orf58P58505 322 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 OCA2Q04671 838 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 KLC1Q07866 573 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 CLN3Q13286 438 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 DNASE1L3Q13609 305 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 ERV3-1Q14264 604 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 PTGR1Q14914 329 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 SPATA21Q7Z572 469 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 PIGWQ7Z7B1 504 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 LAPTM4BQ86VI4 370 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 SCUBE1Q8IWY4 988 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 ZNF595Q8IYB9 648 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 MMP21Q8N119 569 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 LIX1Q8N485 282 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 EFCAB3Q8N7B9 438 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 ENDOVQ8N8Q3 282 aaKnown RBP11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 FAM47BQ8NA70 645 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 UCN3Q969E3 161 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 MIEF2Q96C03 454 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 ZNF764Q96H86 408 aaPredicted RBP11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 TSSK3Q96PN8 268 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 ELAC2Q9BQ52 826 aaKnown RBP11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 YIPF2Q9BWQ6 316 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 FAIM2Q9BWQ8 316 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 GPR87Q9BY21 358 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 RBCK1Q9BYM8 510 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 BRINP2Q9C0B6 783 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 HEY2Q9UBP5 337 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 BAIAP2L1Q9UHR4 511 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 GPN3Q9UHW5 284 aaPredicted RBP11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 CES1P1Q9UKY3 287 aa11.91□□□□□ -0.5
CHMP2A-206ENST00000600118 WDFY3Q8IZQ1 3526 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 IGKV3D-11A0A0A0MRZ8 115 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 C1orf226A1L170 272 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 WASHC1A8K0Z3 465 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 E9PBE3 544 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 PGRMC2O15173 223 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 UBDO15205 165 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 KLHL41O60662 606 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 PRMT3O60678 531 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 TBX19O60806 448 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 B4GALT2O60909 372 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 CTNSO60931 367 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 PRKRAO75569 313 aaKnown RBP11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 UMODP07911 640 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 IDO1P14902 403 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 PCSK2P16519 638 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 DDCP20711 480 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 PTPN4P29074 926 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 TLX1P31314 330 aaPredicted RBP11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 DLSTP36957 453 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 ASMTP46597 345 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 CLDN8P56748 225 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 HSD17B7P56937 341 aa11.9□□□□□ -0.5
CHMP2A-206ENST00000600118 MC1RQ01726 317 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms