RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 CDK15Q96Q40 435 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 NPAS2Q99743 824 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 ERVK-6Q9BXR3 956 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 PRM3Q9NNZ6 103 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 AGPAT4Q9NRZ5 378 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 MS4A12Q9NXJ0 267 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 TBK1Q9UHD2 729 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 DCDC2Q9UHG0 476 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 SPACA6W5XKT8 324 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 COL12A1Q99715 3063 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 HECTD1Q9ULT8 2610 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 TCP11X1B4DZS4 312 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 TGFBR3LH3BV60 316 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 SAP18O00422 153 aaKnown RBP12.97□□□□□ -0.33
ERCC1-208ENST00000589165 PLPP1O14494 284 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 SH3BGRLO75368 114 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 SEMA3DO95025 777 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 OTCP00480 354 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 PYGBP11216 843 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 NEK2P51955 445 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 RAP1GDS1P52306 607 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 INAQ16352 499 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 MEP1AQ16819 746 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 FRG2Q64ET8 278 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 SH2D5Q6ZV89 423 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 MILR1Q7Z6M3 343 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 CRLF3Q8IUI8 442 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 RNF175Q8N4F7 328 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 APCDD1LQ8NCL9 501 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 B3GNT7Q8NFL0 401 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 OR1N1Q8NGS0 311 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 FRG2BQ96QU4 278 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 SERPINI1Q99574 410 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 ZNF717Q9BY31 904 aaPredicted RBP12.97□□□□□ -0.33
ERCC1-208ENST00000589165 DDX31Q9H8H2 851 aaKnown RBP12.97□□□□□ -0.33
ERCC1-208ENST00000589165 SEMA4BQ9NPR2 832 aaPredicted RBP12.97□□□□□ -0.33
ERCC1-208ENST00000589165 ABI3Q9P2A4 366 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 NTNG1Q9Y2I2 539 aa12.97□□□□□ -0.33
ERCC1-208ENST00000589165 GOLGA8RI6L899 631 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 DLX3O60479 287 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 MYO1DO94832 1006 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 ZIC2O95409 532 aaPredicted RBP12.96□□□□□ -0.34
ERCC1-208ENST00000589165 ETHE1O95571 254 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 GNLYP22749 145 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 ATP5F1P24539 256 aaPredicted RBP12.96□□□□□ -0.34
ERCC1-208ENST00000589165 ARL1P40616 181 aaPredicted RBP12.96□□□□□ -0.34
ERCC1-208ENST00000589165 UQCRFS1P47985 274 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 GPR143P51810 404 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 SLAMF1Q13291 335 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 SERTAD2Q14140 314 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 ELAVL1Q15717 326 aaKnown RBP12.96□□□□□ -0.34
ERCC1-208ENST00000589165 ZNF678Q5SXM1 525 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 FCRLBQ6BAA4 426 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 GPR180Q86V85 440 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 RPS19BP1Q86WX3 136 aaKnown RBP12.96□□□□□ -0.34
ERCC1-208ENST00000589165 SLC22A9Q8IVM8 553 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 BEST3Q8N1M1 668 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 OR4F6Q8NGB9 312 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.96□□□□□ -0.34
ERCC1-208ENST00000589165 ADAP2Q9NPF8 381 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 MAP10Q9P2G4 905 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 VTI1BQ9UEU0 232 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 PHF11Q9UIL8 331 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 PCDHGB6Q9Y5F9 930 aa12.96□□□□□ -0.34
ERCC1-208ENST00000589165 PTPN13Q12923 2485 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 SHANK1Q9Y566 2161 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 A0A1B0GTL3 188 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 A0A1W2PPM1 405 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 A8MUA0 341 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 PPP6CO00743 305 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 MAN1A2O60476 641 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 PRAMEF2O60811 474 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 CDH16O75309 829 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 CBX6O95503 412 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 IMPDH1P20839 514 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 CPN2P22792 545 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 PPP2R1BP30154 601 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 BSGP35613 385 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 HSD17B3P37058 310 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 CDH13P55290 713 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 IGLV3-21P80748 117 aaPredicted RBP12.95□□□□□ -0.34
ERCC1-208ENST00000589165 CLCQ05315 142 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 STX4Q12846 297 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 IFT88Q13099 833 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 TUBA3CQ13748 450 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 MRM1Q6IN84 353 aaKnown RBP12.95□□□□□ -0.34
ERCC1-208ENST00000589165 TUBA3EQ6PEY2 450 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 RPS27LQ71UM5 84 aaKnown RBP12.95□□□□□ -0.34
ERCC1-208ENST00000589165 CLNKQ7Z7G1 428 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 TMEM132CQ8N3T6 1108 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 KIF2BQ8N4N8 673 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 MREGQ8N565 214 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 SUN3Q8TAQ9 357 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 GRHL3Q8TE85 626 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 FAR1Q8WVX9 515 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 TANKQ92844 425 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 TMEM237Q96Q45 408 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 SORBS1Q9BX66 1292 aaKnown RBP12.95□□□□□ -0.34
ERCC1-208ENST00000589165 ALOXE3Q9BYJ1 711 aa12.95□□□□□ -0.34
ERCC1-208ENST00000589165 PNO1Q9NRX1 252 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms