RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 CHD7Q9P2D1 2997 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 ZNF282Q9UDV7 671 aaPredicted RBP13.05□□□□□ -0.32
NDEL1-204ENST00000578172 ZNF639Q9UID6 485 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 TMED5Q9Y3A6 229 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 SLC31A1O15431 190 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 SYN1P17600 705 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 IQCCQ4KMZ1 466 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 PRAMEF14Q5SWL7 426 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 PRAMEF13Q5VWM6 474 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 FAM131AQ6UXB0 335 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.05□□□□□ -0.32
NDEL1-204ENST00000578172 CCDC116Q8IYX3 515 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 DNAJA3Q96EY1 480 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 NMNAT1Q9HAN9 279 aaPredicted RBP13.05□□□□□ -0.32
NDEL1-204ENST00000578172 GPSM3Q9Y4H4 160 aa13.05□□□□□ -0.32
NDEL1-204ENST00000578172 GNB5O14775 395 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 NUAK1O60285 661 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 ENTPD6O75354 484 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 SERPINB7O75635 380 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 CTSLP07711 333 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 TSPAN19P0C672 248 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 CD9P21926 228 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 SELENOWP63302 87 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 GRSF1Q12849 480 aaKnown RBP eCLIP13.04□□□□□ -0.32
NDEL1-204ENST00000578172 TJAP1Q5JTD0 557 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 KIAA1161Q6NSJ0 714 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 PLEKHG7Q6ZR37 379 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 USP30Q70CQ3 517 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 CDH24Q86UP0 819 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 CYP4Z2PQ8N1L4 340 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 SLC43A3Q8NBI5 491 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 OR6Q1Q8NGQ2 317 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 SLC5A11Q8WWX8 675 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 TMEM19Q96HH6 336 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 PAWRQ96IZ0 340 aaKnown RBP13.04□□□□□ -0.32
NDEL1-204ENST00000578172 TRNT1Q96Q11 434 aaKnown RBP13.04□□□□□ -0.32
NDEL1-204ENST00000578172 ATP6V1HQ9UI12 483 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 YARS2Q9Y2Z4 477 aaKnown RBP13.04□□□□□ -0.32
NDEL1-204ENST00000578172 SPIN1Q9Y657 262 aaPredicted RBP13.04□□□□□ -0.32
NDEL1-204ENST00000578172 SPEGQ15772 3267 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 H3BSH0 61 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 ZNF701M0R085 212 aaPredicted RBP13.04□□□□□ -0.32
NDEL1-204ENST00000578172 CBSLP0DN79 551 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 ZNF8P17098 575 aaPredicted RBP13.04□□□□□ -0.32
NDEL1-204ENST00000578172 PCMT1P22061 227 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 CBSP35520 551 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 KCNJ8Q15842 424 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 LHFPL3Q86UP9 236 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 OR4N5Q8IXE1 308 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 ZCCHC10Q8TBK6 192 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 RDH12Q96NR8 316 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 FNDC11Q9BVV2 318 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 TBC1D14Q9P2M4 693 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 WBP11Q9Y2W2 641 aaKnown RBP13.04□□□□□ -0.32
NDEL1-204ENST00000578172 OR52A4PA6NMU1 304 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 ANHXE9PGG2 379 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 CDRT1O95170 752 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 SYPL1Q16563 259 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 ZC3H12BQ5HYM0 836 aaKnown RBP13.04□□□□□ -0.32
NDEL1-204ENST00000578172 PDZK1Q5T2W1 519 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 SERPINA11Q86U17 422 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 ZNF300Q96RE9 604 aaPredicted RBP13.04□□□□□ -0.32
NDEL1-204ENST00000578172 TAS2R9Q9NYW1 312 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 PRELID1Q9Y255 219 aa13.04□□□□□ -0.32
NDEL1-204ENST00000578172 MRPS7Q9Y2R9 242 aaKnown RBP13.04□□□□□ -0.32
NDEL1-204ENST00000578172 MAP1BP46821 2468 aaKnown RBP13.03□□□□□ -0.32
NDEL1-204ENST00000578172 ZNF860A6NHJ4 632 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 ADORA3P0DMS8 318 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 CD6P30203 668 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 PIK3CBP42338 1070 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 TM4SF4P48230 202 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 SOX9P48436 509 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 KCNJ10P78508 379 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 IRF5Q13568 498 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 CAMK1Q14012 370 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 SMU1Q2TAY7 513 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 PLEKHS1Q5SXH7 462 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 C9orf64Q5T6V5 341 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 LIPIQ6XZB0 460 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 IQCHQ86VS3 1027 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 KCT2Q8NC54 265 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 SLC9A6Q92581 669 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 MMP28Q9H239 520 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 RDH14Q9HBH5 336 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 TLR4O00206 839 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 GABARAPO95166 117 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 RYKP34925 604 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 GSTM5P46439 218 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 UGT2B15P54855 530 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 SPATS1Q496A3 300 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 PYDC2Q56P42 97 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 ZMAT1Q5H9K5 638 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 LRIF1Q5T3J3 769 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 LIPJQ5W064 366 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 C22orf42Q6IC83 251 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 PRSS48Q7RTY5 328 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 KBTBD8Q8NFY9 601 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 ENKURQ8TC29 256 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 NUS1Q96E22 293 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 ASPNQ9BXN1 380 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms