RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 MARCH7Q9H992 704 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 SLC25A19Q9HC21 320 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 MYNNQ9NPC7 610 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 CLEC2DQ9UHP7 191 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 FFAR1O14842 300 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 RGS13O14921 159 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 IDH3BO43837 385 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 KLHL18O94889 574 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 KRT75O95678 551 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 KLK1P06870 262 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 ZNF24P17028 368 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 RPL3P39023 403 aaKnown RBP16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 MEF2AQ02078 507 aaPredicted RBP16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 RHAGQ02094 409 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 ZNF284Q2VY69 593 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 SLC34A3Q8N130 599 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 GPR151Q8TDV0 419 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 FAM83CQ9BQN1 747 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 DNAJC27Q9NZQ0 273 aa16.44■□□□□ 0.22
TOM1L1-221ENST00000575882 DSPPQ9NZW4 1301 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 HELZP42694 1942 aaKnown RBP16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 CXorf51AA0A1B0GTR3 108 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 PIPSLA2A3N6 862 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 FOXE1O00358 373 aaPredicted RBP16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 SOX14O95416 240 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 NPPBP16860 134 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 CSTF2P33240 577 aaKnown RBP eCLIP16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 PRLHRP49683 370 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 LIM2P55344 173 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 DSTNP60981 165 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 PUM1Q14671 1186 aaKnown RBP eCLIP16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 RPS26P11Q5JNZ5 115 aaPredicted RBP16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 ATAD3CQ5T2N8 411 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 FAM180BQ6P0A1 224 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 LAS2Q8IYD9 372 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 MMP21Q8N119 569 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 NEDD4LQ96PU5 975 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 GULP1Q9UBP9 304 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 KCND3Q9UK17 655 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 LSM2Q9Y333 95 aaKnown RBP16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 DYRK1BQ9Y463 629 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 AP3D1O14617 1153 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 CSO75390 466 aaKnown RBP16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 RECQLP46063 649 aaPredicted RBP16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 ATN1P54259 1190 aaPredicted RBP16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 CCL23P55773 120 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 ZMAT1Q5H9K5 638 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 DEFB128Q7Z7B8 93 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 CACTIN-AS1Q8N1I8 211 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 SETD6Q8TBK2 473 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 ASB15Q8WXK1 588 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 FZD3Q9NPG1 666 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 N6AMT1Q9Y5N5 214 aa16.43■□□□□ 0.22
TOM1L1-221ENST00000575882 SCN5AQ14524 2016 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 PCM1Q15154 2024 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 TRAV19A0A0A6YYK7 116 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 CAPN5O15484 640 aaPredicted RBP16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 LEFTY1O75610 366 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 C1orf105O95561 183 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 ADAP00813 363 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 IL3P08700 152 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 IGFBP1P08833 259 aaPredicted RBP16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 C1GALT1C1LP0DN25 315 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 GPR50Q13585 617 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 TMEM220Q6QAJ8 160 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 TMEM25Q86YD3 366 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 KLHL6Q8WZ60 621 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 GLYATL1Q969I3 302 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 EFCAB11Q9BUY7 163 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 UCK2Q9BZX2 261 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 SPNS1Q9H2V7 528 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 SNTG1Q9NSN8 517 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 REV1Q9UBZ9 1251 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 MUTYHQ9UIF7 546 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 V9GYH0 126 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 A0A1W2PRU2 124 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 PITPNM1O00562 1244 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 OSMP13725 252 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 SNRPGP62308 76 aaKnown RBP16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 RPS26P62854 115 aaKnown RBP16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 TMEM115Q12893 351 aaPredicted RBP16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 SPHARQ15513 63 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 ARMC4Q5T2S8 1044 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 REEP3Q6NUK4 255 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 TMPRSS11AQ6ZMR5 421 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 LAX1Q8IWV1 398 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 TP53INP1Q96A56 240 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 TRMT61AQ96FX7 289 aaKnown RBP16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 OR2B2Q9GZK3 357 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 SLC6A16Q9GZN6 736 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 CCDC177Q9NQR7 707 aaPredicted RBP16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 SPG21Q9NZD8 308 aa16.42■□□□□ 0.22
TOM1L1-221ENST00000575882 PLXNA2O75051 1894 aa16.41■□□□□ 0.22
TOM1L1-221ENST00000575882 A6NL46 340 aa16.41■□□□□ 0.22
TOM1L1-221ENST00000575882 WASH3PC4AMC7 463 aa16.41■□□□□ 0.22
TOM1L1-221ENST00000575882 NEDD8-MDP1E9PL57 170 aa16.41■□□□□ 0.22
TOM1L1-221ENST00000575882 AZGP1P25311 298 aaKnown RBP16.41■□□□□ 0.22
TOM1L1-221ENST00000575882 PSMA1P25786 263 aaKnown RBP16.41■□□□□ 0.22
TOM1L1-221ENST00000575882 RORCP51449 518 aa16.41■□□□□ 0.22
TOM1L1-221ENST00000575882 SEC23BQ15437 767 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms