RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ARRDC5A6NEK1 342 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 FFAR1O14842 300 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 RECKO95980 971 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 CTSAP10619 480 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 ZNF24P17028 368 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 CSTF2P33240 577 aaKnown RBP eCLIP14.93□□□□□ -0.02
NUP88-207ENST00000573584 MEF2AQ02078 507 aaPredicted RBP14.93□□□□□ -0.02
NUP88-207ENST00000573584 RHAGQ02094 409 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 ZNF284Q2VY69 593 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 NXNL2Q5VZ03 156 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 FAM180BQ6P0A1 224 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 TMEM220Q6QAJ8 160 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 BARHL1Q9BZE3 327 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 SLC25A19Q9HC21 320 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 MYNNQ9NPC7 610 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 GULP1Q9UBP9 304 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 MUTYHQ9UIF7 546 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 DYRK1BQ9Y463 629 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 N6AMT1Q9Y5N5 214 aa14.93□□□□□ -0.02
NUP88-207ENST00000573584 RGS13O14921 159 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 IDH3BO43837 385 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 KLHL18O94889 574 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 PSMA1P25786 263 aaKnown RBP14.92□□□□□ -0.02
NUP88-207ENST00000573584 LIM2P55344 173 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 CCL23P55773 120 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 DSTNP60981 165 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 TMEM115Q12893 351 aaPredicted RBP14.92□□□□□ -0.02
NUP88-207ENST00000573584 DEFB128Q7Z7B8 93 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 TMEM25Q86YD3 366 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 GPR151Q8TDV0 419 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 KLHL6Q8WZ60 621 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 NEDD4LQ96PU5 975 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 FAM83CQ9BQN1 747 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 SNTG1Q9NSN8 517 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 DNAJC27Q9NZQ0 273 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 PIPSLA2A3N6 862 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 NRG2O14511 850 aaPredicted RBP14.92□□□□□ -0.02
NUP88-207ENST00000573584 LEFTY1O75610 366 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 SOX14O95416 240 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 C1GALT1C1LP0DN25 315 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 PRLHRP49683 370 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 RORCP51449 518 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 SPHARQ15513 63 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 ATAD3CQ5T2N8 411 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 ARMC4Q5T2S8 1044 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 HIST2H2AA3Q6FI13 130 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 REEP3Q6NUK4 255 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 GATAD2AQ86YP4 633 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 ZNF513Q8N8E2 541 aaPredicted RBP14.92□□□□□ -0.02
NUP88-207ENST00000573584 EFCAB11Q9BUY7 163 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 UCK2Q9BZX2 261 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 SLC6A16Q9GZN6 736 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 KCND3Q9UK17 655 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 TMCC3Q9ULS5 477 aa14.92□□□□□ -0.02
NUP88-207ENST00000573584 TRAV19A0A0A6YYK7 116 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 A0A1W2PRU2 124 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 PITPNM1O00562 1244 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 AP3D1O14617 1153 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 C1orf105O95561 183 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 IGFBP1P08833 259 aaPredicted RBP14.91□□□□□ -0.02
NUP88-207ENST00000573584 OSMP13725 252 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 ZMAT1Q5H9K5 638 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 TMPRSS11AQ6ZMR5 421 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 LAS2Q8IYD9 372 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 SETD6Q8TBK2 473 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 GLYATL1Q969I3 302 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 TMEM80Q96HE8 168 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 MIEF1Q9NQG6 463 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 DDX28Q9NUL7 540 aaKnown RBP14.91□□□□□ -0.02
NUP88-207ENST00000573584 LSM2Q9Y333 95 aaKnown RBP14.91□□□□□ -0.02
NUP88-207ENST00000573584 DSPPQ9NZW4 1301 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 CAPN5O15484 640 aaPredicted RBP14.91□□□□□ -0.02
NUP88-207ENST00000573584 CSO75390 466 aaKnown RBP14.91□□□□□ -0.02
NUP88-207ENST00000573584 UGT2B17O75795 530 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 MFN2O95140 757 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 ADAP00813 363 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 IL3P08700 152 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 SNRPGP62308 76 aaKnown RBP14.91□□□□□ -0.02
NUP88-207ENST00000573584 ARSIQ5FYB1 569 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 RPS26P11Q5JNZ5 115 aaPredicted RBP14.91□□□□□ -0.02
NUP88-207ENST00000573584 CEACAM20Q6UY09 585 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 GDPGP1Q6ZNW5 385 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 MMP21Q8N119 569 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 ASB15Q8WXK1 588 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 OR2B2Q9GZK3 357 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 FZD3Q9NPG1 666 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 SPG21Q9NZD8 308 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 REV1Q9UBZ9 1251 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 CASP8AP2Q9UKL3 1982 aa14.91□□□□□ -0.02
NUP88-207ENST00000573584 C5orf58C9J3I9 102 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 NEDD8-MDP1E9PL57 170 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 H3BN98 237 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 MAPK9P45984 424 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 RPS26P62854 115 aaKnown RBP14.9□□□□□ -0.02
NUP88-207ENST00000573584 SP3Q02447 781 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 GPR50Q13585 617 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 UNC5DQ6UXZ4 953 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 ZNF517Q6ZMY9 492 aaPredicted RBP14.9□□□□□ -0.02
NUP88-207ENST00000573584 TRIM69Q86WT6 500 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 CACTIN-AS1Q8N1I8 211 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms